Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00183 ATGGCTTTCTTCCCAGCAAATTTCATGCTCCAAACCCCTCACCATGATGATCACCATCATCATCAACCTCCACCTTCTCTCACCTCAATTCTACCAACGTGTGCACCTCAAGAATATCATGGGGGAGTGACCATTCTAGGAAAGAGATCCATGTCATTTTCATCAGGGATTGAGCATGGAGAAGAGGCCAATAATGCTGAGGAAGATTTGTCTGATGATGGATCACAAGCAGGGGAGAAGAAGAGAAGGCTCAACATGGAGCAAGTGAAGACACTTGAGAAGAGCTTTGAGTTGGGGAACAAGCTTGAGCCAGAGAGAAAAATGCAGCTTGCAAGAGCACTTGGCTTGCAACCAAGACAAATTGCTATATGGTTCCAGAATAGAAGGGCCAGGTGGAAGACCAAGCAGTTGGAGAAAGACTATGATGTTCTCAAAAGACAGTATGAAGCTGTCAAGTCAGATAATGATGCACTTCAAGCTCAGAACCAAAAACTTCAGGCTGAGATATTGGCACTGAAAAGTAGAGAGCCAACAGAATCCATAAACCTTAACAAAGAAACAGAAGGATCCTGCAGCAATAGAAGTGAGAACAGCTCAGACATCAAGTTGGATATCTCAAGGACACCAGCTATTGACAGTCCTCATTCTACACATCAGCAACAGCCAAGCAGACCCTTCTTTCCTCCTTCTTCTGTTAGGCCTGCAGGAGTTGCTCAGCTTTTCCAAACTTCTTCAAGACCAGAACTTGCATCATGCCAAAAGATTGACCAAATGGTCAAAGAAGAAAGCCTAAGCAACATGTTTTGTGGCATGGATGATCAATCTGGGTTTTGGCCTTGGTTGGAGCAGCAGCATTTCAATTGA 864 0.4433 MAFFPANFMLQTPHHDDHHHHQPPPSLTSILPTCAPQEYHGGVTILGKRSMSFSSGIEHGEEANNAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYEAVKSDNDALQAQNQKLQAEILALKSREPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPHSTHQQQPSRPFFPPSSVRPAGVAQLFQTSSRPELASCQKIDQMVKEESLSNMFCGMDDQSGFWPWLEQQHFN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00183 287 MobiDBLite consensus disorder prediction 208 226 - -
Gma02g00183 287 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 287 - -
Gma02g00183 287 CDD homeodomain 80 136 IPR001356 GO:0003677
Gma02g00183 287 PRINTS Lambda-repressor HTH signature 106 115 IPR000047 GO:0003677
Gma02g00183 287 PRINTS Lambda-repressor HTH signature 115 131 IPR000047 GO:0003677
Gma02g00183 287 Coils Coil 127 175 - -
Gma02g00183 287 Gene3D - 72 141 - -
Gma02g00183 287 SMART HOX_1 78 139 IPR001356 GO:0003677
Gma02g00183 287 MobiDBLite consensus disorder prediction 180 199 - -
Gma02g00183 287 ProSiteProfiles 'Homeobox' domain profile. 75 135 IPR001356 GO:0003677
Gma02g00183 287 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 287 IPR045224 GO:0003700
Gma02g00183 287 MobiDBLite consensus disorder prediction 183 199 - -
Gma02g00183 287 Pfam Homeodomain 80 133 IPR001356 GO:0003677
Gma02g00183 287 MobiDBLite consensus disorder prediction 208 227 - -
Gma02g00183 287 ProSitePatterns 'Homeobox' domain signature. 110 133 IPR017970 GO:0000981|GO:0006355
Gma02g00183 287 Pfam Homeobox associated leucine zipper 135 175 IPR003106 GO:0006355|GO:0043565
Gma02g00183 287 SUPERFAMILY Homeodomain-like 71 137 IPR009057 -
Gma02g00183 287 MobiDBLite consensus disorder prediction 56 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00183 Gma-Chr2 1715873 1718251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00183 1 287 Homeobox Transcription Factor Family AT1G69780 63.545 6.80e-123 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma02g00183 Homeodomain 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00183 K09338 - gmx:100808033 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00183 02 1715873 1718251 Gma02g00183 02 1715873 1718251 ECH