Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00162 ATGGACCCAGAAACTCAAGAAAAGTATGCCAGTAATGGCAAGGTCATGTTTGGCTCCACCATCCTTCTCTTCCTAATAGTAATCATCGTAGTTTTCGTTCACACCTTCCGCGACTCATGCTTCCGCCGCCACCGCCGCCACCGCCACGCCATTCGAACCGTTTCCTCCGTGGCTTTTAACGAGGGCCTTTGCCCTTCCGTTCTCAAATTCCTTCCCACCTTTACGTATTCCTCCGACACCCACCTCTCCATCCACGATTGCGCCGTCTGCTTGTCGGAGTTCGCCGACGGCGAAGAAGGCCGCTTCCTTCCGAACTGTAACCACGCTTTCCACGCCCATTGCGTTGACATTTGGTTCCACTCTCACTCTAACTGTCCACTTTGCCGAACCCCGGTTCGCCGATACGCCGCGCCAGTCCAACCGTCCTCTGATACTGAACCGGGTTCGGTGGGTTTATCTTCTTATCCTGCACCGGTTTGGTGCCCGAGAAAGTCGTTGGAGCTCGTAGGCATGACAGCGGAGTTAGAACAAAACCCGGTTTCGGAGCCGGGTCATGGATCCACGATATCACGGGTTGGGAATTGA 585 0.547 MDPETQEKYASNGKVMFGSTILLFLIVIIVVFVHTFRDSCFRRHRRHRHAIRTVSSVAFNEGLCPSVLKFLPTFTYSSDTHLSIHDCAVCLSEFADGEEGRFLPNCNHAFHAHCVDIWFHSHSNCPLCRTPVRRYAAPVQPSSDTEPGSVGLSSYPAPVWCPRKSLELVGMTAELEQNPVSEPGHGSTISRVGN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00162 194 SMART ring_2 87 128 IPR001841 -
Gma02g00162 194 CDD RING-H2_EL5_like 86 129 - -
Gma02g00162 194 Pfam Ring finger domain 86 129 IPR001841 -
Gma02g00162 194 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 6 146 - -
Gma02g00162 194 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Gma02g00162 194 SUPERFAMILY RING/U-box 68 135 - -
Gma02g00162 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 137 IPR013083 -
Gma02g00162 194 PANTHER RING-H2 FINGER PROTEIN ATL64 6 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00162 Gma-Chr2 1529036 1529620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00162 7 137 Rapid Response to Elicitors AT3G16720 42.568 3.28e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00162 - - gmx:102669188 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00162 02 1529036 1529620 Gma02g00162 02 1529036 1529620 ECH