Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00159 ATGAACAACCTCACACTTGCATCCATTCTGACCGTGATTTCTGCGCTACTACTCTTCTTGGGAACAACTCATTTCACTAACACCCCAATAACAATAACAAGAGCCCCAGATCAAAAACACCTCCACCATTTCCAAAAGCACATACAAGTAGTAGCCAAATCCACATGCCAAGGAACACTCTACCCAGACCTATGTGTCTCAACACTTGCCACATTCCCAGATCTCGCCACAAAATCTGTCCCACAAGTGATATCCTCAGTGGTGAACCACACCATGTACGAGGTAAGATCATCGTCCTACAATTGCAGCGGCCTCAAAAAGATGCTCAAAAACCTCAACCCACTCGACCAGAGAGCCCTCGACGACTGTCTCAAACTGTTCGAAGACACCAACGTTGAGCTCAAAGCCACCATCGACGATCTCTCCAAGAGCACCATAGGGTCGAAGCGGCACCATGACCTGCAGACTATGTTAAGCGGAGCAATGACCAACTTGTACACGTGCCTCGATGGATTTGCTTACAGCAAAGGACGCGTGAGGGACAGAATCGAGAAGAAGCTGCTTGAGATATCGCACCACGTGAGCAACTCGTTGGCCATGCTGAACAAAGTGCCTGGAGTGAAGAAATTAACAACTTCGGAATCTGTGGTTTTCCCCGAATATGGAAACATGAAAAAGGGTTTCCCCTCGTGGGTGTCCTCCAAAGACCGAAAGCTTCTTCAAGCTAAAGTGAAAGAGACCAAGTTCGATCTTCTTGTAGCGAAAGATGGCACTGGCAACTTCACCACTATAGGGGAAGCACTCGCTGTGGCTCCCAACTCCAGCACAACCAGGTTTGTGATACACATAAAAGAGGGGGCATACTTCGAGAATGTGGAAGTGATAAGGAAGAAGACGAATCTGATGTTTGTTGGAGACGGGATTGGAAAGACAGTAGTGAAAGGCAGTAGGAATGTTGTGGATGGGTGGACCACTTTTCAATCTGCTACTGTTGCTGTAGTAGGAGCAGGATTCATAGCAAAGGGTATAACATTTGAGAACTCAGCAGGGCCTGACAAACACCAAGCTGTGGCACTTAGAAGTGGTGCTGACTTCTCAGCTTTCTACCAATGCAGTTTCGTTGGCTACCAAGACACTCTCTACGTGCATTCCCTACGCCAATTCTACCGTGAATGCGACATTTACGGTACTGTAGACTTCATTTTCGGCAATGCAGCTGTGGTATTCCAAAACTGCAACTTATACGCACGCAAGCCAAACGAAAACCAGAAGAACTTGTTCACCGCACAAGGCAGAGAGGACCCTAACCAAAACACTGGCATATCCATCTTGAACTGCAAGATTGCAGCTGCAGCAGATTTGATCCCTGTGAAATCCTCCTTCAAGAGCTACCTAGGACGTCCTTGGAAAATGTACTCTAGGACTGTTGTCCTAAAATCTTTCGTGGAGGATCTGATTGACCCAGCAGGGTGGTTGGAATGGAATGAAACATTTGCATTGGATACGTTGTATTATGGGGAGTACATGAATAGAGGTCCAGGTGCAAACACAAATGGTAGGGTAACGTGGCCAGGTTATAGGGTAATTAACAGCTCCACTGAGGCAACCCAATTCACAGTTGGGCAGTTTATTCAAGGCAATGATTGGTTGAACAGTACTGGCATTCCATTCTTCTCTGGTTTGGTTTGA 1689 0.4677 MNNLTLASILTVISALLLFLGTTHFTNTPITITRAPDQKHLHHFQKHIQVVAKSTCQGTLYPDLCVSTLATFPDLATKSVPQVISSVVNHTMYEVRSSSYNCSGLKKMLKNLNPLDQRALDDCLKLFEDTNVELKATIDDLSKSTIGSKRHHDLQTMLSGAMTNLYTCLDGFAYSKGRVRDRIEKKLLEISHHVSNSLAMLNKVPGVKKLTTSESVVFPEYGNMKKGFPSWVSSKDRKLLQAKVKETKFDLLVAKDGTGNFTTIGEALAVAPNSSTTRFVIHIKEGAYFENVEVIRKKTNLMFVGDGIGKTVVKGSRNVVDGWTTFQSATVAVVGAGFIAKGITFENSAGPDKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAAADLIPVKSSFKSYLGRPWKMYSRTVVLKSFVEDLIDPAGWLEWNETFALDTLYYGEYMNRGPGANTNGRVTWPGYRVINSSTEATQFTVGQFIQGNDWLNSTGIPFFSGLV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00159 562 Pfam Plant invertase/pectin methylesterase inhibitor 53 200 IPR006501 GO:0004857
Gma02g00159 562 CDD PMEI-like_3 54 206 - -
Gma02g00159 562 PANTHER PECTINESTERASE 20 558 - -
Gma02g00159 562 Pfam Pectinesterase 250 547 IPR000070 GO:0030599|GO:0042545
Gma02g00159 562 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 203 IPR006501 GO:0004857
Gma02g00159 562 SMART PMEI_2 47 200 IPR006501 GO:0004857
Gma02g00159 562 SUPERFAMILY Pectin lyase-like 248 560 IPR011050 -
Gma02g00159 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 206 IPR035513 -
Gma02g00159 562 Coils Coil 124 144 - -
Gma02g00159 562 PANTHER PECTINESTERASE 20 558 - -
Gma02g00159 562 Gene3D - 244 561 IPR012334 -
Gma02g00159 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 205 IPR035513 -
Gma02g00159 562 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00159 Gma-Chr2 1515643 1520376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00159 76 557 Carbohydrate Esterase AT4G02320 55.758 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00159 K01051 - gmx:100802881 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00159 02 1515643 1520376 Gma02g00159 02 1515643 1520376 ECH
Gma10g00164 10 1529009 1533308 Gma02g00159 02 1515643 1520376 GST
Gma19g02019 19 49156773 49158685 Gma02g00159 02 1515643 1520376 PCT
Gma03g01988 03 45532993 45535137 Gma02g00159 02 1515643 1520376 PCT
Gma02g00159 02 1515643 1520376 Gma19g02020 19 49168732 49173987 PCT