Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00148 ATGGCGGCATTGTCGTTCTCAGTGGCATCCGTGGTGGAAGATGTGCTTCAACAACACGGTACTCGCCTCAAAGATCTTGACTTGGAATCTAGAAAAGCAGAAGAAGCTGCATTCAGAAGATATGAAGCAGCAGGGTGGCTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTGCCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTCTGTAATGTTCTTAATAAAGTTCAACCTGGTGCTGTACCCAGGGTTGTGGAGAGTCCTATTGATTCTGCACTAGTCCCCGATGGAGCACCCTTATCCGCATTTCAGTATTTTGAAAATGTGAGGAACTTTCTGCTGGCTGTGCAGGAAATTGGAGTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCAGCCAGGATTGTGAACAGCGTCTTAGCTCTTAAGTCCTATAGTGAATGGAAACAGACTGGGGGTAATGGTGTGTGGAAATTTGGAGGAACTATCAAACCCACTGTCTCTTCAAAATCTTTTGTGAGAAAAAACTCTGAGCCATTTACTAATTCCCTGTCAAGGAACTCGTCCATCAATGAAAAATCCATGACTGCTCTTACCTCTGATGTCGAGTCTAATAAAATGTCTGGGTCTCACTCTTTGAGTATGCTTGTTCGTGCAGTACTATTAGATAAGAAGCCTGAAGAAGTTCCATTGTTAGTTGAATCAGTCTTGAATAAGGTCGTAGAGGAGTTTGAGCATCGCATTGCCAGCCAGGGTGAACAGACAAAAATTTCAAGAGGTGCTGTGTTGCTAGGCAATGGATCTGTATCAAAGTTTGTTATGGCAGATAAAAAGATGGATAACAAGATTCCTATGGTAACAAAGAAAGAAAGATTGCTCCATAAAAACTTTGTCGATGATGAGGAATCGAAAAGACAACTTCTGAAGAAGCAAATGCTCTTTGATCAACAGCAAAGAGATATTCAAGAACTAAAGCATACAATTCACACCACCAAAGCTGGTATGCAGTTCCTGCAAATGAAGTTTCATGAGGAGTTCTCCAATCTAGGCAGGCATGTTCATGGCTTAGCTCATGCTGCTTCTGGATATAATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTTCAGGATCTTAAGGGAAGTATAAGGGTGTATTGTCGAGTAAGACCCTTCTTATCTGCACAAGCAAATTATTCAAGCACAGTGAATAATATAGAAGATGGAACTATCACAATTAATATTCCTTCAAAGAACGGGAAAGGTCACAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCAGCATCCCAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGTTTCAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTCACACTATGACTGGACCAAAAGAGATCACCGAGAAAAGCAGAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAGAGACACTTTTTGCTATGACGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGATCAAACAAAAGATATCCTTTTAGCT 1654 0.4093 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPRVVESPIDSALVPDGAPLSAFQYFENVRNFLLAVQEIGVPTFEASDLEQGGKSARIVNSVLALKSYSEWKQTGGNGVWKFGGTIKPTVSSKSFVRKNSEPFTNSLSRNSSINEKSMTALTSDVESNKMSGSHSLSMLVRAVLLDKKPEEVPLLVESVLNKVVEEFEHRIASQGEQTKISRGAVLLGNGSVSKFVMADKKMDNKIPMVTKKERLLHKNFVDDEESKRQLLKKQMLFDQQQRDIQELKHTIHTTKAGMQFLQMKFHEEFSNLGRHVHGLAHAASGYNRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSAQANYSSTVNNIEDGTITINIPSKNGKGHRSFNFNKVFGPSASQAEVFSDMQPLIRSVLDGFNVCIFAYGQTGSGKTHTMTGPKEITEKSRGVNYRALSDLFLTADQRRDTFCYDVSVQMIEIYNEQVRDLLVTDGSNKRYPFS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00148 551 ProSiteProfiles Kinesin motor domain profile. 395 551 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma02g00148 551 SMART kinesin_4 393 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma02g00148 551 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Gma02g00148 551 Pfam Microtubule binding 381 539 IPR031852 GO:0008017
Gma02g00148 551 Coils Coil 16 36 - -
Gma02g00148 551 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Gma02g00148 551 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
Gma02g00148 551 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 548 - -
Gma02g00148 551 Gene3D - 24 189 IPR036872 -
Gma02g00148 551 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 548 - -
Gma02g00148 551 Gene3D Kinesin motor domain 336 550 IPR036961 -
Gma02g00148 551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 547 IPR027417 -
Gma02g00148 551 SMART ch_5 39 157 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00148 Gma-Chr2 1421403 1424661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00148 383 540 Calmodulin-binding Proteins AT5G65930 38.125 1.53e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00148 K10406 - gmx:100801279 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00148 02 1421403 1424661 Gma02g00148 02 1421403 1424661 ECH
Gma02g00148 02 1421403 1424661 Gma10g00154 10 1457399 1460566 ECH