Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00145 ATGGCTCCTTTTCCTCTTATGTGCTTCGTTATTTTGCTCCTATCCTCCACTGTTTCAGTCACAGCCACCGCCACCCAAACAACCTTAACAGTGGGAAAACTCGACCAAGTTCCACACATAATGTGCAAGGAGTGCGAGCTTCCACCCCCACCCCCTAAAGAGTGTcctccgccgccgataccactagcacctccaccaccgttaccaccatcacctccaccaccgttaccaccatcacctccaccaccgttaccaccatcacctccgccacccttaccgccacctataccgctatctcctccgccacccttaccgccatctcctccgccacccttaccgccatctccttcgccGCCAAATCTACCATCACCaccaccactggctccaccaccaccattaccaccacttgcaccaccaccaccaCCGCTACCCCCATTGCCGATCCCACCAAACGGACCCGGCGAATACCTAGTGCCACCACCGCGCGATCCGAACCTGCCAGATCTTGACGATCTCAACGAAAAAATGTCAAAAGCAAACGCAAAGAACAAATCCCCCTCCACCGAGCTCCACCCTCCTTACTTCGAGATGATTGCGGATGCGATATCGTCCTTGAAAGACCGCACGGGTTCGAGCCAGCCAGCGATAGCCAAGTTCATCGAGGACAAGCACAGCAAAGTGCTCCCTCCCAACTTCCGGAAACTTCTCTCCGTTCAGTTGAAGAAACTCGTCAAATCGGAGAAGCTTTACAAGGTCAAAAACTCTTACAAACTTTCTTCCGCCACGGACAAAGAGACCCAGAAGAATACCGAAACCGAGCCCAAACAGAAGGTTGAAAAGAAGAAGAAGAAGAAGAAGAAGGTGGGTGAGAAGATTAAGAGGCTGAGCCAAGTGAAGACACCCGAAACTCTGAAGAAGAAAGCACCCACCAAGAAGGACGCGGCGGCAACTAAGAAGAAATCTGCGTCGGCGGTGGAAGGTTCAGGAGGAGGGAAAGTGAAGTGTTTGAGTCAGGTGAAGACCCCTGAGGCCTTGAAGAAGAAGAAGCCCAATTTGACACCCAAACCTTCCAGGCCCAACAGGAATGCTAGGAAATGA 1098 0.3962 MAPFPLMCFVILLLSSTVSVTATATQTTLTVGKLDQVPHIMCKECELPPPPPKECPPPPIPLAPPPPLPPSPPPPLPPSPPPPLPPSPPPPLPPPIPLSPPPPLPPSPPPPLPPSPSPPNLPSPPPLAPPPPLPPLAPPPPPLPPLPIPPNGPGEYLVPPPRDPNLPDLDDLNEKMSKANAKNKSPSTELHPPYFEMIADAISSLKDRTGSSQPAIAKFIEDKHSKVLPPNFRKLLSVQLKKLVKSEKLYKVKNSYKLSSATDKETQKNTETEPKQKVEKKKKKKKKVGEKIKRLSQVKTPETLKKKAPTKKDAAATKKKSASAVEGSGGGKVKCLSQVKTPEALKKKKPNLTPKPSRPNRNARK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00145 365 MobiDBLite consensus disorder prediction 51 192 - -
Gma02g00145 365 Coils Coil 278 298 - -
Gma02g00145 365 CDD H15 191 261 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma02g00145 365 Pfam linker histone H1 and H5 family 191 258 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma02g00145 365 MobiDBLite consensus disorder prediction 293 319 - -
Gma02g00145 365 PANTHER HISTONE H1 176 355 - -
Gma02g00145 365 MobiDBLite consensus disorder prediction 351 365 - -
Gma02g00145 365 MobiDBLite consensus disorder prediction 255 365 - -
Gma02g00145 365 SMART h15plus2 188 255 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma02g00145 365 MobiDBLite consensus disorder prediction 264 278 - -
Gma02g00145 365 MobiDBLite consensus disorder prediction 51 166 - -
Gma02g00145 365 PRINTS Proline rich extensin signature 49 65 - -
Gma02g00145 365 PRINTS Proline rich extensin signature 71 83 - -
Gma02g00145 365 PRINTS Proline rich extensin signature 90 111 - -
Gma02g00145 365 SUPERFAMILY "Winged helix" DNA-binding domain 190 268 IPR036390 -
Gma02g00145 365 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 190 260 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma02g00145 365 Gene3D - 187 290 IPR036388 -
Gma02g00145 365 PANTHER HISTONE H1 176 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00145 Gma-Chr2 1362737 1368829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00145 192 258 Single Myb Histone (SMH) Gene Family AT1G72740 43.284 2.99e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00145 K11275 - gmx:100306187 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00145 02 1362737 1368829 Gma02g00145 02 1362737 1368829 ECH
Gma10g00151 10 1391832 1392457 Gma02g00145 02 1362737 1368829 GST