Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00122 ATGGCCCAGGTTCACGTTCCGCCTCATAATGCGATTCTCGTTCGCAACGGTGGTGGTACTGTTAGAAATCAGTTCGTGACGACGTCGCTATACGTTGGAGATCTCGACCCGAACGTCACGGACGCCCAACTGTATGATTTGTTCAACCAATTGGGGCAAGTCGTATCCGTTAGGATTTGTAGGGACTTGACAGTAGGAGATCGCTCAGTTATGATTATGTCAACTTTAACAACCTGCAAGATTTTGTTGTCCTTCTCTCCTGTTACATATTCATTTGATTGCCATAAAAAAATCTCATCCATTTAA 306 0.4412 MAQVHVPPHNAILVRNGGGTVRNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRICRDLTVGDRSVMIMSTLTTCKILLSFSPVTYSFDCHKKISSI 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00122 101 SUPERFAMILY RNA-binding domain, RBD 19 63 IPR035979 GO:0003676
Gma02g00122 101 PANTHER POLYADENYLATE-BINDING PROTEIN 2 18 65 - -
Gma02g00122 101 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 66 IPR000504 GO:0003723
Gma02g00122 101 Gene3D - 21 82 IPR012677 -
Gma02g00122 101 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 62 IPR000504 GO:0003723
Gma02g00122 101 PANTHER RNA BINDING PROTEIN 18 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00122 Gma-Chr2 1168901 1169206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00122 18 63 Eukaryotic Initiation Factors Gene Family AT4G34110 67.391 3.10e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00122 K13126 - gmx:100813735 112.079