Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00115 ATGGTGTCGGATTCTGATTCCTTGGAACACTTGATGCGGGTGATGAGAAAAATCAGACCAAGTATAATGGTAGTTCTTGAGGTGGAAGCAATGCATAATTCACCCTCCTGTGTGAATCGCTTCATTGAGGCATTGTTCTTCTACGCGGCATTTTTTGACTGCATTGGGACCAGCATGAAGCAGGATCATGAATGCAGAATGAGAATTGAGGGAATATTATCTGAAGGGATACGAAACATTGTTGCAATGGAAGATGGAGAAAGGACGGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAGACTACATTTAGCGAGTCATCTTTGTACCAAGCCAACTTGGTTGCCAAAAAGTTTGCGTGTGGGAATTTCTGTACTGTGGATAGAAACGGGAAGTGTCTAATAGTTGGATGGAAGGGGACCCCAATTCATTCAATTTCAGTTTGGAAGTTTCTTTGA 483 0.4203 MVSDSDSLEHLMRVMRKIRPSIMVVLEVEAMHNSPSCVNRFIEALFFYAAFFDCIGTSMKQDHECRMRIEGILSEGIRNIVAMEDGERTVRNVKIDVWRRFFARYRMVETTFSESSLYQANLVAKKFACGNFCTVDRNGKCLIVGWKGTPIHSISVWKFL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00115 160 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 157 IPR005202 -
Gma02g00115 160 Pfam GRAS domain family 6 158 IPR005202 -
Gma02g00115 160 ProSiteProfiles GRAS family profile. 1 158 IPR005202 -
Gma02g00115 160 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00115 Gma-Chr2 1127044 1127526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00115 1 159 GRAS Transcription Factor Family AT3G03450 31.447 2.75e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma02g00115 GRAS 8.9e-33 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00115 - - ccaj:109806982 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00115 02 1127044 1127526 Gma02g00115 02 1127044 1127526 ECH