Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00108 ATGTTGCTGCTCGTCGTTTCCACCGCTTTAACCGGTGCGTTGAAATGGTTGCTTGTGTTGCTATCTTGCATGGTGTGGTTTGTGGTTGATTATGGTGCGTGTGGCAGAGCACTGCAGCTGGAAGCACCTTCTTTGTCTCCAGCTGCAGCACCTGTTGTTGCTGTTGATGATCTGCCACTGCCGACGAATGCTCATGGGTTAAAGCATTTGCCTGCACCGATTCCGTCACGCGCCAATTTCACCAAAGGGAGAGGAGAATTACAGCCCCCGGTTTCCGGGTTTAAGAATATTGCCCCTATGCATCCCATTGCTGATGCTATTCCTTCTGCTCTCGCTCAGCCACCATTGTCCCCTTATGTTTCCGATTGTTGCAAACAAGACATGGTGTGGAAACGTGGCAGTGAGGTTTGCCACTGTGCTTATCCCATAAAGCTAGACCTACTTCTTTTGAATGTCTCTGAAAACCCCGACCAGAATGCTTTTCTCAATGGTTTGGCCACCCAACTTGAGCTGCAGACTACCCAAATTGAAATTATTAAATTTTATCTACTCAGCTTATCGACGTTGAATATATCAATGGATATCACTCCACATAAAGGGATCAGTTTCTCGGCCGAGGAAGCAGCTAAAATAAACTCATTGCTTTTACTGCATAAGGTTCAACTAGACCGCAGATTTGTGGGCGACTACAAAGTAATCAATATAACCTGGTTTAAACCTCCACCTCATTCTCCAGCTCCTACAATTTCTACATCACCTATGAAAGCTCCCCAGAGACGAGCACCTACAGCTACATTGTCGAGTACTTCAGACAGGGGAAGGCGTTCAAACTTGCTTCTTATTCTTGGAATTGTCACTGGCATACTCTTCATTTCCATTGTATGTGTACTTATACTTTGCTTATGCACAATGAGGCCAAAAACAAAAACACCTCCCACAGAAACTGAAAAGCCAAGGATTGAAAGTGCAGTTTCTGCTGTTGGGTCTCTTCCCCACCCAACCAGTACCCGCTTTATTGCTTATGAAGAACTTAAAGAAGCAACAAATAATTTTGAACCAGCAAGTGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTATAAAGGTGTCTTAAATGATGGAACTGCTGTTGCAATTAAGAGACTTACTAGTGGAGGGCAACAAGGTGATAAAGAATTTTTAGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTATAGCAACCGTGACTCATCACAAAATCTACTTTGCTACGAGCTTGTCCCAAATGGAAGCTTGGAGGCCTGGCTTCATGGTCCACTGGGAATAAATTGCCCTTTGGATTGGGACACTAGAATGAAGATCGCCCTtgatgctgcaagaggacttgcatacatgcatgaagattcacagccctgtgttatacacagagatttcaaggcatccaacatattgcttgaaaacaactttcatgctaaagttgcagattttggtctagctaaACAGGCACCTGAAGGCAGAGCTAATTATCTATCTACTAGAGTCATGGGCACATTTGGGTATGTAGCGCCTGAATATGCTATGACTGGACACCTGCTAGTTAAAAGCGATGTTTATAGCTACGGCGTTGTCTTGCTGGAACTGTTGATCGGAAGGAAACCAGTGGATATGTCACAGCCATCTGGACAAGAAAACCTTGTTACTTGGGCAAGGCCAATTCTTAGAGATAAGGACAGCTTGGAAGAACTTGCTGATCCAAGGCTTGGGGGAAGGTACCCAAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCTGCAATGGGTGAAGTGGTACAATCACTTAAAATGGTGCAGCGGGTCACAGAATCTCATGATCCTGTGTTAGCGTCATCCAATACACGGCCCAACCTGAGACAGTCCTCTACCACTTACGATTCTGATGGGACATCTTCAATGTTTTCTTCAGGTCCTTACTCTGGTCTAAGTACCTTTGACTATCACAACATTTCGAGAACGGCTGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2088 0.4205 MLLLVVSTALTGALKWLLVLLSCMVWFVVDYGACGRALQLEAPSLSPAAAPVVAVDDLPLPTNAHGLKHLPAPIPSRANFTKGRGELQPPVSGFKNIAPMHPIADAIPSALAQPPLSPYVSDCCKQDMVWKRGSEVCHCAYPIKLDLLLLNVSENPDQNAFLNGLATQLELQTTQIEIIKFYLLSLSTLNISMDITPHKGISFSAEEAAKINSLLLLHKVQLDRRFVGDYKVINITWFKPPPHSPAPTISTSPMKAPQRRAPTATLSSTSDRGRRSNLLLILGIVTGILFISIVCVLILCLCTMRPKTKTPPTETEKPRIESAVSAVGSLPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGRVYKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYMHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLIGRKPVDMSQPSGQENLVTWARPILRDKDSLEELADPRLGGRYPKEDFVRVCTIAAACVAPEASQRPAMGEVVQSLKMVQRVTESHDPVLASSNTRPNLRQSSTTYDSDGTSSMFSSGPYSGLSTFDYHNISRTAVFSEDLHEGR 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00108 695 MobiDBLite consensus disorder prediction 244 270 - -
Gma02g00108 695 MobiDBLite consensus disorder prediction 634 663 - -
Gma02g00108 695 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 79 695 - -
Gma02g00108 695 SUPERFAMILY Protein kinase-like (PK-like) 327 628 IPR011009 -
Gma02g00108 695 MobiDBLite consensus disorder prediction 249 270 - -
Gma02g00108 695 Pfam Protein kinase domain 354 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00108 695 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Gma02g00108 695 PANTHER OS01G0750732 PROTEIN 79 695 - -
Gma02g00108 695 Gene3D Transferase(Phosphotransferase) domain 1 429 646 - -
Gma02g00108 695 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Gma02g00108 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Gma02g00108 695 ProSiteProfiles Protein kinase domain profile. 351 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00108 Gma-Chr2 1096342 1103723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00108 10 695 Receptor kinase-like Gene Family AT4G02010 65.919 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma02g00108 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00108 - - gmx:100792818 1345.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00108 02 1096342 1103723 Gma02g00108 02 1096342 1103723 ECH
Gma10g00114 10 1129796 1136735 Gma02g00108 02 1096342 1103723 GST
Gma19g02066 19 49554883 49561211 Gma02g00108 02 1096342 1103723 PCT
Gma03g02030 03 45872482 45880278 Gma02g00108 02 1096342 1103723 PCT
Gma02g00108 02 1096342 1103723 Gma19g02066 19 49554883 49561211 PCT
Gma02g00108 02 1096342 1103723 Gma03g02030 03 45872482 45880278 PCT