Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00104 ATGGAGAAGAAGGAGATGGCTGTGAAAACTGAGGATGCGATTGGGTCCTCTTCTTTCCCTTGTTATAATTCAAACCTTTATCCATTCTCGAACGCGTTTGATTTCTCTGAGGTGGACAAAAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTATAGTCCTCTGCCTGAGTTACCACAGCTTTCAACTGTGTCCGTGCAACCTCATCACTCTACAGTTAAGGTTCCGTCTGATAACGGGAAAGAGTGTTCTGAGGTGTTGAATCACCAACCTGCCACTCCTAACTCTTCTTCCATTTCATCCGCGTCCAGTGATGCAGTCAATGATGAACAGAATAAGACTCTTCTAGACCAAGCAGAAGAAGATGATGATGAAGAAGAAGGACAACAAAAGACTAAGAAACAGTTGAAGCCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCATTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGTGTGGAGCGATCTTTCACTGATCCAAGCGTTGTAGTGACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGTTCAGGTGTCTCCGCTGGATACGCCAACAACTTCGGTTCAGTTTTGCCACCGGGAAACTACTTATCCCAGTATCAGCACTACCACCACCAACAACAACAACAGCTTCTTGTCAACACATTGTCCTCTTTGGGTTTTCCTTACAATGATTCTTCATCTCCAAAGAACGCTGTTTTTACTCAAGAGAGACGGCTTTGCAGTAATCAAGGGACGAATGCGTTTCTGAGGGACCATGGGCTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 963 0.4507 MEKKEMAVKTEDAIGSSSFPCYNSNLYPFSNAFDFSEVDKSSLGFMELLGVQDYSPLPELPQLSTVSVQPHHSTVKVPSDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQNKTLLDQAEEDDDEEEGQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVSAGYANNFGSVLPPGNYLSQYQHYHHQQQQQLLVNTLSSLGFPYNDSSSPKNAVFTQERRLCSNQGTNAFLRDHGLLQDVVPSHMLKEE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00104 320 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g00104 320 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g00104 320 Gene3D WRKY domain 149 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g00104 320 MobiDBLite consensus disorder prediction 56 153 - -
Gma02g00104 320 PIRSF WRKY_txn_fact_IIc 1 320 IPR017396 GO:0003700
Gma02g00104 320 PANTHER WRKY TRANSCRIPTION FACTOR 1 312 - -
Gma02g00104 320 SUPERFAMILY WRKY DNA-binding domain 156 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g00104 320 Pfam WRKY DNA -binding domain 165 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g00104 320 MobiDBLite consensus disorder prediction 58 115 - -
Gma02g00104 320 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 312 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00104 Gma-Chr2 1054439 1056767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00104 34 320 WRKY Transcription Factor Family AT2G47260 47.649 1.36e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma02g00104 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00104 - - gmx:100784158 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00104 02 1054439 1056767 Gma02g00104 02 1054439 1056767 ECH
Gma10g00109 10 1086339 1089572 Gma02g00104 02 1054439 1056767 GST
Gma19g02070 19 49613149 49614703 Gma02g00104 02 1054439 1056767 PCT
Gma03g02033 03 45929063 45930996 Gma02g00104 02 1054439 1056767 PCT
Gma02g00104 02 1054439 1056767 Gma19g02070 19 49613149 49614703 PCT
Gma02g00104 02 1054439 1056767 Gma03g02033 03 45929063 45930996 PCT