Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00094 ATGAACCTTAATATATACCACTGTGACCACTGGCCAGAGCATATGGCAAGCAAGTTGAAAAGGACATGGCTGCTGCTAAAAAGCTCAATAATACCTATTTCGTTTGAAAACTTGTCCGATGGATGCTGTCATGCATCTAAGGTAGAGCTTTTGCCTTTCTTCAACCAACTCCTCTCCCATAGTTGTCATTGTTGTTCTGCACTGCTGCTTTCTATTTCTTTAGCAGATTTGAAGTTTGGAGACAGAGAGGTGACCTTGACAAAGAGTTGGGGAGGCAAGATGTGTGTGAAGTACATGCTAAAGGAGTTAGTCAAAGGATCTCAAGTCGTCAAAATCAAAAACATAAAACATACCAAGAAAAAAACAGTTCAGCGTTCTGCAAGACTGCAACTATTGGGGAATCTTTCGCAGCCTCCCACTAAATCTTTTGAAAAAATATTGAATCCTCAAAGTGCCGATCCTCCTAAATCCAATGTGATGAGAAGCTTATCAGATATGGTAATTAAAAAAGGACCATGGACTGAGGAAGAAGATTCTGTTCTGATCAACTATGTCAACGTCCACGGCGAAGGCCACTGGAACTCCCTCGCTCGCTCTTCAGGTTTAAAGCGAACGGGCAAAAGCTGCAGACTAAGATGGTTCAACTACTTGCGCCCAAATGTTCGACGTGGGAACATCACCCTTCAAGAACAGCTCTTGATTCTCGAACTCCATTCCCACTGGGGCAATCGGTGGGCCAAAATAGCAGAACAACTGCCAGGGAGAACAGACAATGAGATAAAGAACTATTGGAGGACTCGAGTGGTGAAGCAGGCTAAGCAACTCAAATGTCATGTAAACAGCAAACAGTTCAGGGACGCCTTGCGTTTCGTTTGGATGCCGCGCCTTATGGAGCAGATTCAGGCTTCTTCTTCTTCCTATGGCCTTGATCAAACCACGTTGTGCAACACTCAAACCCACAGAGACAACTCAATGGTTTCATCGTACTCATCAGAGGTTGATCTTCAGCCTCCTTCTCTTTCTGATACAAGTATAACTTCATCATCTTACAATTTAATTGGTGATGGAGGCCTGTCAACGGAAAGTGCAGAAAAGGGGTCCATATACTCTCTTTGGCAGCATTGGGACTACTCTGACATACAAGCATTTGAGCCATGCAATGGTTTTGGTGATGCAGACTTGTGGACCGATGAAAACATGTGGTTCTTGCAGCAGCATCTTGCTGATGAATTATGA 1236 0.4385 MNLNIYHCDHWPEHMASKLKRTWLLLKSSIIPISFENLSDGCCHASKVELLPFFNQLLSHSCHCCSALLLSISLADLKFGDREVTLTKSWGGKMCVKYMLKELVKGSQVVKIKNIKHTKKKTVQRSARLQLLGNLSQPPTKSFEKILNPQSADPPKSNVMRSLSDMVIKKGPWTEEEDSVLINYVNVHGEGHWNSLARSSGLKRTGKSCRLRWFNYLRPNVRRGNITLQEQLLILELHSHWGNRWAKIAEQLPGRTDNEIKNYWRTRVVKQAKQLKCHVNSKQFRDALRFVWMPRLMEQIQASSSSYGLDQTTLCNTQTHRDNSMVSSYSSEVDLQPPSLSDTSITSSSYNLIGDGGLSTESAEKGSIYSLWQHWDYSDIQAFEPCNGFGDADLWTDENMWFLQQHLADEL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00094 411 Pfam Myb-like DNA-binding domain 170 217 IPR001005 -
Gma02g00094 411 Pfam Myb-like DNA-binding domain 223 266 IPR001005 -
Gma02g00094 411 Gene3D - 167 223 - -
Gma02g00094 411 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 161 404 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma02g00094 411 SUPERFAMILY Homeodomain-like 168 264 IPR009057 -
Gma02g00094 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 222 272 IPR017930 -
Gma02g00094 411 ProSiteProfiles Myb-like domain profile. 165 217 IPR001005 -
Gma02g00094 411 SMART sant 169 219 IPR001005 -
Gma02g00094 411 SMART sant 222 270 IPR001005 -
Gma02g00094 411 ProSiteProfiles Myb-like domain profile. 218 268 IPR001005 -
Gma02g00094 411 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 161 404 - -
Gma02g00094 411 CDD SANT 172 217 IPR001005 -
Gma02g00094 411 Gene3D - 227 268 - -
Gma02g00094 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 221 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00094 Gma-Chr2 972887 980662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00094 157 407 MYB Transcription Factor Family AT2G47190 47.037 8.31e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma02g00094 Myb_DNA-binding 4.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00094 K09422 - gmx:778040 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00094 02 972887 980662 Gma02g00094 02 972887 980662 ECH
Gma10g00101 10 1002995 1004327 Gma02g00094 02 972887 980662 GST
Gma19g02079 19 49683722 49685675 Gma02g00094 02 972887 980662 PCT
Gma03g02042 03 45999186 46000777 Gma02g00094 02 972887 980662 PCT
Gma02g00094 02 972887 980662 Gma19g02079 19 49683722 49685675 PCT
Gma02g00094 02 972887 980662 Gma03g02042 03 45999186 46000777 PCT