Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma02g00081 | ATGAGTTGTTTCAGCTGTTGCGAAGAGGATGACCTCCATAAGGCTGCTGAAAGTGGAGGACCCTATGTTGTAAAAAATCCAGCAGGGAATGATGGAAATTATCATGCTTCTCAAACTGCAAAGCAGGGCACTCAGCCTGTTAAACCTCAGCCCATTGAAGTTCCTAATATATCAGCAGATGAACTGAAAGAAGTTACGGATAACTTTGGTCAAGATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAGGCTGCAGCAATCAAGAATTTGGATGCCAGTAAACAGCCTGATGAGGAATTTTTAGCCCAGGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAGTTGCTTGGATATTGCATTGATGGAAGCTCCCGTATTCTTGCTTATCAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACACGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCAGTTTTGACATGGGCACAAAGAGTAAAAATTGCTGTAGGGGCTGCAAGAGGACTTGAATACTTGCATGAGAAGGCTGATCCACATATTATTCACCGGGACATCAAGTCAAGTAATGTGCTAATCTTTGATGATGATGTTGCTAAAATTGCAGATTTTGATTTATCAAATCAGGCTCCCGACATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGTTATCATGCTCCGGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTTGGCGTTGTCCTTCTGGAACTTCTGACTGGAAGGAAACCCGTTGATCATACACTACCACGTGGACAACAGAGTCTGGTTACTTGGGCTACACCAAAACTCAGTGAGGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCCGCTGTTGCTGCACTGTGTGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACTGCACGACCTGGACCTGCCGGTGAAACACCAAATTAA | 1086 | 0.4319 | MSCFSCCEEDDLHKAAESGGPYVVKNPAGNDGNYHASQTAKQGTQPVKPQPIEVPNISADELKEVTDNFGQDSLIGEGSYGRVYYGVLKSGQAAAIKNLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCIDGSSRILAYQFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARPGPAGETPN | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma02g00081 | 361 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 195 | 207 | IPR008271 | GO:0004672|GO:0006468 | |
Gma02g00081 | 361 | PANTHER | PTO-INTERACTING PROTEIN 1-LIKE | 1 | 359 | - | - | |
Gma02g00081 | 361 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 143 | - | - | |
Gma02g00081 | 361 | SMART | serkin_6 | 69 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g00081 | 361 | CDD | STKc_IRAK | 75 | 348 | - | - | |
Gma02g00081 | 361 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 345 | IPR011009 | - | |
Gma02g00081 | 361 | PANTHER | PTO-INTERACTING PROTEIN 1-LIKE | 1 | 359 | - | - | |
Gma02g00081 | 361 | PIRSF | ILK | 6 | 352 | - | - | |
Gma02g00081 | 361 | Pfam | Protein tyrosine and serine/threonine kinase | 73 | 345 | IPR001245 | GO:0004672|GO:0006468 | |
Gma02g00081 | 361 | MobiDBLite | consensus disorder prediction | 31 | 50 | - | - | |
Gma02g00081 | 361 | ProSiteProfiles | Protein kinase domain profile. | 69 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g00081 | 361 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 97 | IPR017441 | GO:0005524 | |
Gma02g00081 | 361 | MobiDBLite | consensus disorder prediction | 17 | 50 | - | - | |
Gma02g00081 | 361 | Gene3D | Transferase(Phosphotransferase) domain 1 | 144 | 353 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma02g00081 | Gma-Chr2 | 880658 | 883097 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma02g00081 | 49 | 346 | Receptor kinase-like Gene Family | AT4G02010 | 50.331 | 1.75e-92 | 290 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIII | Gma02g00081 | PK_Tyr_Ser-Thr | 6.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma02g00081 | K13436 | - | gmx:100808383 | 699.893 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma02g00081 | 02 | 880658 | 883097 | Gma02g00081 | 02 | 880658 | 883097 | ECH | |
Gma10g00089 | 10 | 895089 | 899480 | Gma02g00081 | 02 | 880658 | 883097 | GST | |
Gma19g02095 | 19 | 49814205 | 49817876 | Gma02g00081 | 02 | 880658 | 883097 | PCT | |
Gma02g00081 | 02 | 880658 | 883097 | Gma19g02095 | 19 | 49814205 | 49817876 | PCT |