Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00080 ATGGTAAACGGAAAAATACTTGTATCTGGAGTTTCCCTAATCCTTGTGGTGGGTGTTGCCATCGGTGTGGTGGTTGTTGTTAATAGAAAGGACACATCTGATCCTGAAGTAGCAGCTCAGCAAAAATCTGTGAAGGCAATGTGTGAAGGCACCGATGACCCTAAACTTTGTCATGATACTCTTAGTACCGTGAAAAGCTCGAGTGTCTCAGACCCAAAGGCATACATAGCTGCTGGAGTGGAAGCAACGGCGAAGAGTGTGATCCAAGCGTTGAACATGAGTGATAGGCTCAAAGTGGAACATGGAGACAAAGACCCTGGCATCAAAATGGCCCTTGATGATTGCAAGGACTTGATCGAATTCGCGTTGGACAGCATCGAGTCCTCGGCTAATTTGGTTAATGAACACAACATTCAAGCTTTGCATGATCAATCTCCTGACCTCAGGAACTGGTTGAGTGCAATTATCTCGTACCAGCAATCTTGCATGGACGGGTTTAACAACGGGACAAACGGTGAGGAAGAGGTTAAGAAACAATTGCACACAGATAGTTTGGACCAAATGGGGAAGCTCACTGGCATAGTCCTTGACATTGTCACTAATTTATCCAAAATCCTTCAGAGTTTTGACCTCAAGTTGGATTTGAACCCGGCTTCTCGTCGTCTTCTCGAGGTTGATGCTGAAGGGTTCCCTACGTGGTTCTCTGCTGCAGATCGCAGGCTACTTGATAAGATGAACCAAGGAGATGCACCCCCACCCAATGCAGTGGTTGCCCTAGATGGTAGTGGCCAATTTAAATCCGTTAAGCAAGCTATTGACTCCTACCCTAAGAATTTCAAAGGCAGATTCATTATTTATGTTAAAGCTGGTGTTTATAACGAGTATATCCTTATTCCCAAGAAGTCAGAGAATATCATGATTTATGGTGATGGCCCTACCAAGACCATTATTACTGGTAACAAAAACTTTATAGATGGCGTCAAGACAATGCAAACTGCCACCTTCGCCAATACTGCACCTGGATTCATCGCAAAGTCAATCGCATTCGAGAACACCGCTGGCGCGAAGAAGCACCAGGCAGTGGCATTCAGAAACCAGGGAGACATGTCGGCCATGTTCGACTGCGCCATGCACGGTTACCAAGACACATTGTACGTCCACGCGAACCGTCAATTCTACCGCAACTGCGAAATCTCCGGCACCATAGACTTCATCTTCGGAGCATCTGCAACCTTAATTCAGAACTCAAGAGTCATAGTAAGGAAGCCAGAAGCAAACCAATTCAACACAGTGACCGCAGATGGAACCAAGCAGAAGAACATGGCCACAGGAATTGTGCTCCAGAACTGCGAGATCTTGCCGGAGCAGGCTCTGTTCCCTTCAAGGTTCCAAACGAAATCGTACTTGGGGAGGCCGTGGAAGGAGTTCGCGAGAACAGTGGTTATGGAATCGAACATTGGCGACTTCATTCAGCCAGAGGGGTGGACCCCTTGGGATGGGAACCTGTATCTTGATACGTTGTACTATGCTGAGTATGCTAACGTTGGACCTGGTTCTAACGTTCAAGGAAGGGTAAAGTGGAGGGGTTACCATCCCAATATTAATAAGAACGAAGCTGCACAATTCACTGCTGCCCAATTCCTCAGAGGTGGACCTGCTGGAGATGCTGATGGTTGGTTGAAGGCTACTGGCGTTCCTTATACTATTGGTTTCACCAAATAG 1722 0.4675 MVNGKILVSGVSLILVVGVAIGVVVVVNRKDTSDPEVAAQQKSVKAMCEGTDDPKLCHDTLSTVKSSSVSDPKAYIAAGVEATAKSVIQALNMSDRLKVEHGDKDPGIKMALDDCKDLIEFALDSIESSANLVNEHNIQALHDQSPDLRNWLSAIISYQQSCMDGFNNGTNGEEEVKKQLHTDSLDQMGKLTGIVLDIVTNLSKILQSFDLKLDLNPASRRLLEVDAEGFPTWFSAADRRLLDKMNQGDAPPPNAVVALDGSGQFKSVKQAIDSYPKNFKGRFIIYVKAGVYNEYILIPKKSENIMIYGDGPTKTIITGNKNFIDGVKTMQTATFANTAPGFIAKSIAFENTAGAKKHQAVAFRNQGDMSAMFDCAMHGYQDTLYVHANRQFYRNCEISGTIDFIFGASATLIQNSRVIVRKPEANQFNTVTADGTKQKNMATGIVLQNCEILPEQALFPSRFQTKSYLGRPWKEFARTVVMESNIGDFIQPEGWTPWDGNLYLDTLYYAEYANVGPGSNVQGRVKWRGYHPNINKNEAAQFTAAQFLRGGPAGDADGWLKATGVPYTIGFTK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00080 573 CDD PMEI-like_3 46 204 - -
Gma02g00080 573 PANTHER PECTINESTERASE 4 571 - -
Gma02g00080 573 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Gma02g00080 573 PANTHER PECTINESTERASE 4 571 - -
Gma02g00080 573 Pfam Plant invertase/pectin methylesterase inhibitor 43 198 IPR006501 GO:0004857
Gma02g00080 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 202 IPR006501 GO:0004857
Gma02g00080 573 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
Gma02g00080 573 Gene3D - 251 571 IPR012334 -
Gma02g00080 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 204 IPR035513 -
Gma02g00080 573 SUPERFAMILY Pectin lyase-like 250 569 IPR011050 -
Gma02g00080 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 203 IPR035513 -
Gma02g00080 573 SMART PMEI_2 39 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00080 Gma-Chr2 872295 877829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00080 6 571 Carbohydrate Esterase AT3G05610 42.207 5.01e-145 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00080 K01051 - gmx:100789650 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00088 10 891941 893814 Gma02g00080 02 872295 877829 GST
Gma19g02097 19 49833167 49840592 Gma02g00080 02 872295 877829 PCT