Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00064 ATGGCAGATTCAATTGGTTGCACAAGAAATGGAGCCACGAAAGGGGATGGGGCTGTCGTGCCAAATACTGAAAGGGTAATCTCTAATGTGAGAAATTGCCCTGGAGAAAAGAGCCAAGTTGAAGGAGTGACACCTTCCTTCAATATGAAGCAAACTGGGGGTCCAAGAGAGGTGAAGTGTTCTTGGTTCTCTAAATCCTTCTACCAAAGAACACCTACTTCTGAGGCCATTCTGCAAGCCAATCAAGACTCTACTTTACTAGTCTCTCCTGGTGGCTGGGATGAGCCTAATGGAATAGAATCTGCAGCTGGGAAACACAACGTTCAGTTTTTCTCTCATCAGACTTCAGTTTTTGCTTCTAATAATTACAAGAAGTTTGATGCGGACACTACCAGAATGAAGGGAAGGAAGGACGGGACCACTGAAAAGGAAAAGCAATTTACATTTACCACTGCACAGCAAGTCCTAGAGTCTGACAAAACCGATCTAGAAGACAAAATAAATAGAGCAGAAAACAGAACTGAGAATTTGAGGATGAAGCTTTGCCAAATATTGGGGACCACTTCTTCCCCTAAGAGTAGCCATTCAGGTTCTCATGCTCATAACACGGAGGAGGAAAGTTTGCCACTTGAGCAGCATTTGAACCAGAAGGAAAATAAATCCACTAAGACCATACAAAATTCGGATACTATAGAAACTGATTCAGAAAATCCTGATCATACTCCTCAGAGGCCAGTAACTCGTTCTTTAAGCAGAAAGAGAGCGTATTCCAAAAAGCAACCAGGAAAAGGTAAAAGTGGCCCATCTTCAAAAAACACAGAGAAGCTTGGAGAAAAAAGTATATTCTCTTTTGAGGAAAAATGGACTGGAAGGCAAAATGCTTTTCCAAATGATGGTTCCTTGAAGAAAAAGAGTCAAAGAAAGAATTCTAAAATTGGGAAAAATAAGATCTGCTTAACTGAAAATGACACCACAGATAAACTTCATCAAGGCACTTCGAAGACTGATCTACCATTGCATGACAGAACAACATTTTCACTTGGGAAGATAGCGGGGGGATTTAGCTCACCTGAATATCAGACAAAACACCCTCAGACAGAGAACACAAACCAGGAAAAAGAATTTTACCAGCCACCAATAGTATATACAGATAAGCATGGAGAAGTTGAGGTTTCAGAAAATGGAAACCAGCAAGAATATAGAAGCAATCCAGTTATACAGAATGTTGCTGCTAAGTCACAAGATGATTTTCCAAGTCCTACATTTCAACTTAAGTCACCTATTTTAAGTTTTTCTCCTAACTCAACACCAAAAACAGGCCAAAAGGAAACTGATGTTAATAGTCTAGCATCAACTGAAAGGACATTTTCTCTGGGAAGCATTCATAGTTTAAGAACTCCCCAGGCTTCAGAGCCAGACTTCAACAGGCTAGGAGAACAAATGCAACTTTCTGATATGGAAGAACTCAAGTCTTTTATTCCCAGAAAAGACAAATCTTCTGAGACAGAGAAAAAAGAGCAGGGTGGTGGTTCATCTGATTCATCATCTGAAGAGGAGAACTTTCAAGGATATCATGAAGGTTCAAGAGTAGGACATGCTTACGAGAGGAAAAAATTTGATCTTCATCCTATCAAAAGGCTGTGCAAGCAAGAAGGCAATAAATTTAATGACAGGAGTCCAGCTTCAGTGTCTTCAAAAGGCAAAAATTCACTTCATAGGACAGGAGACAGTGATTGGATCGATGAAGCTTCTGAGCAGAATCAAGATGGGTTTGTAAGGGCTGTTGAACTGTTAGCCTTGGAATTGGGCAAACTTCAGAGCAAACTTAAGTCAATGACAAGTCAGAAATCCTCAGAAATTTTGAAGTCTGTTGCTGAAGAAATACATCTGCAGTTGCAGAATGTTCATACCCAGATTCAGACAGACATGGGAAAGCTTACAAGTCTCGGTAAATCAAAGAGAAAACGGATGGAAACAAGATTTGAAGATCAACAGAAACAGTTGAGGTTAATATACAATAGATTCAAGGAAGAGGTTAATCAGCATCTACAGGATTGCAGGAGCACTGTTGAAGATCTTGAAGCAGATCAGATAGAGATCAAGAGAGCCATGGAAAAGCAAAGAGTAGCACATAAGAAGCTTCTGTCGCAAGTTGAAGAAGCAGTGCAGATCCAACTTGATGACGCTCAAAGGAAAATCACAGTCACCCAGGAGAAGGCGAGGGGGAAACTTCTACAATTGAAGCAGAATGATGAAGAACCAGAAGATGTAGTGAAGGAAAAGCCTGCTCGGGAGGGCACCGGAGTCAAAAGAAGTAGGAATGCACAAGTTCATAATTTATGTGAAAGGAAGCGAAGAGATAAGATCAACAAGAGGATGCGTATATTGAAGGAGCTCATACCCAATTGCAATAAGACGGACAAAGCATCAATGCTTGATGATGCCATCGAATATCTTAAGACCCTAAAGCTTCAGATACAGATGATGTCAATGGATGCTGGATTTTGTATACCTTTTATGATGCTACGTAATGCTGCTCATCATATGATGAACACACCCCTTTTACATCAGTTAATGGGACTTGGAATGGGGTTCAGGCCAGACACAGCCATACCTTGTAGCCTCCCTCAGTTCCCTATTACACCTTTGCCTGCCATCACTGACAACAGAGTTCACTTTTTTGGTTTCCCTAACCAAGTGCCACCCATGCCAATTTCTCATGCACCTTTCATTCCAATGCTTGGAAATCCTTCTACACAAACCCCTCTTGCAACTAGCACAGCTATCAACCTGGCAGAAAACCCTGCTTCTTCCCAGTTAACAACTCTAATGGCCTCAGTCCCCAAGAACTTGTATCTAAGTGGGCAATCTGAATATGCAACAAAGCAAGCACCGAGTCAAGTTTCCCTTCACCACTAG 2919 0.4125 MADSIGCTRNGATKGDGAVVPNTERVISNVRNCPGEKSQVEGVTPSFNMKQTGGPREVKCSWFSKSFYQRTPTSEAILQANQDSTLLVSPGGWDEPNGIESAAGKHNVQFFSHQTSVFASNNYKKFDADTTRMKGRKDGTTEKEKQFTFTTAQQVLESDKTDLEDKINRAENRTENLRMKLCQILGTTSSPKSSHSGSHAHNTEEESLPLEQHLNQKENKSTKTIQNSDTIETDSENPDHTPQRPVTRSLSRKRAYSKKQPGKGKSGPSSKNTEKLGEKSIFSFEEKWTGRQNAFPNDGSLKKKSQRKNSKIGKNKICLTENDTTDKLHQGTSKTDLPLHDRTTFSLGKIAGGFSSPEYQTKHPQTENTNQEKEFYQPPIVYTDKHGEVEVSENGNQQEYRSNPVIQNVAAKSQDDFPSPTFQLKSPILSFSPNSTPKTGQKETDVNSLASTERTFSLGSIHSLRTPQASEPDFNRLGEQMQLSDMEELKSFIPRKDKSSETEKKEQGGGSSDSSSEEENFQGYHEGSRVGHAYERKKFDLHPIKRLCKQEGNKFNDRSPASVSSKGKNSLHRTGDSDWIDEASEQNQDGFVRAVELLALELGKLQSKLKSMTSQKSSEILKSVAEEIHLQLQNVHTQIQTDMGKLTSLGKSKRKRMETRFEDQQKQLRLIYNRFKEEVNQHLQDCRSTVEDLEADQIEIKRAMEKQRVAHKKLLSQVEEAVQIQLDDAQRKITVTQEKARGKLLQLKQNDEEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQMMSMDAGFCIPFMMLRNAAHHMMNTPLLHQLMGLGMGFRPDTAIPCSLPQFPITPLPAITDNRVHFFGFPNQVPPMPISHAPFIPMLGNPSTQTPLATSTAINLAENPASSQLTTLMASVPKNLYLSGQSEYATKQAPSQVSLHH 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00064 972 Coils Coil 153 180 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 416 448 - -
Gma02g00064 972 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 773 822 IPR011598 GO:0046983
Gma02g00064 972 MobiDBLite consensus disorder prediction 750 772 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 492 529 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 750 768 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 492 512 - -
Gma02g00064 972 Gene3D - 769 832 IPR036638 GO:0046983
Gma02g00064 972 SMART finulus 779 828 IPR011598 GO:0046983
Gma02g00064 972 CDD bHLH_AtPIF_like 773 835 - -
Gma02g00064 972 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 772 832 IPR036638 GO:0046983
Gma02g00064 972 MobiDBLite consensus disorder prediction 358 374 - -
Gma02g00064 972 Coils Coil 701 739 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 551 576 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 263 277 - -
Gma02g00064 972 Coils Coil 676 696 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 555 570 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 354 374 - -
Gma02g00064 972 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY3 1 749 IPR037731 GO:0051321
Gma02g00064 972 MobiDBLite consensus disorder prediction 187 316 - -
Gma02g00064 972 MobiDBLite consensus disorder prediction 198 218 - -
Gma02g00064 972 Pfam Helix-loop-helix DNA-binding domain 776 822 IPR011598 GO:0046983
Gma02g00064 972 Pfam Meiosis-specific protein ASY3-like 2 748 IPR046845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00064 Gma-Chr2 764068 771900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00064 751 842 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 62.366 2.30e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g00064 HLH 4.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00064 - - gmx:100783804 1453.73