Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00060 ATGACAATGAAGCTGCTGCTTTTGGTAGCCGTTGTTGAAGTTGCATGCTTAGTTTCTGGGATCTTGTCCTTTGGATCTGAGACACTCTCTGAGCTTTCTTTCTTAGAAAACGATGTCGTCTCAACAGCAAGACCTTCCTCTTCATCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGGAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACGGTGCCTGGATACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTAATTCATTTGGAGGGAGGAGGATGGTGTAATACCATCAGAAACTGTGTCTATAGAAAAAATACTCGTCGTGGATCCTCGAAACACATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTTAAATTACGGTACTGTGATGGGGCGTCTTTCAGTGGAGATAGTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCCAAAGGAATGCAGAAAGCCGATCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCGATAATACACTGTGATGAGTTCCGGAGCTTGTTTCCAAAATCTTCCAAAGTCAAATGTTTGAGTGATGGAGGTTTTTTTCTTGACGTAATGGATGTATCTGGGGGACGCACACTGAGGACTCTTTTTGGAGGTGTGGTTCAGTTGCAGGAGTTACAAAAAAATCTGCCAAAAAGTTGTCTTGACCAACTAGACCCAACTTCGTGCTTCTTTCCTCAGAATATGATCGAACATGTTGAGACCCCATTGTTTCTACTCAACGCTGCTTATGATGTGTGGCAGGTCCAAGCTAGTTTAGCCCCACCTTCAGCTGACCGCCTTGGCTCTTGGAATGAATGCAAATCGAACCATGCAAATTGTAGCTCATCTCAAATGCAGTTCCTCCAAGCAGACTTCAGAAATCAAATGCTTAGTGACATTAAAGACTTCTCGAGCTCATCTCAAACTGGGCTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCCCTTATCGAGGACAAGCCAATTGCAGTTGCTATTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1263 0.4347 MTMKLLLLVAVVEVACLVSGILSFGSETLSELSFLENDVVSTARPSSSSQPLMVDLTLIQGADSKGAVCLDGTVPGYHLDRGFGSGADSWLIHLEGGGWCNTIRNCVYRKNTRRGSSKHMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEELMSKGMQKADQALLSGCSAGGLASIIHCDEFRSLFPKSSKVKCLSDGGFFLDVMDVSGGRTLRTLFGGVVQLQELQKNLPKSCLDQLDPTSCFFPQNMIEHVETPLFLLNAAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQMQFLQADFRNQMLSDIKDFSSSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAIGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00060 420 PANTHER PECTIN ACETYLESTERASE 2 418 - -
Gma02g00060 420 Pfam Pectinacetylesterase 47 398 IPR004963 GO:0016787
Gma02g00060 420 PANTHER NOTUM-RELATED 2 418 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00060 Gma-Chr2 721467 725793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00060 1 419 Carbohydrate Esterase AT3G62060 63.785 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00060 K19882 - gmx:100786972 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01380 10 40646780 40656346 Gma02g00060 02 721467 725793 GST
Gma19g02113 19 50023255 50028834 Gma02g00060 02 721467 725793 PCT
Gma03g02076 03 46323178 46328825 Gma02g00060 02 721467 725793 PCT
Gma02g00060 02 721467 725793 Gma19g02113 19 50023255 50028834 PCT
Gma02g00060 02 721467 725793 Gma03g02076 03 46323178 46328825 PCT