Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00043 ATGGGGAGGACAGGGAAATGGCTTAGGAACTTGTTGACAGGGAAGAGATCAGACAGAGAGAAAGAGAAGGAAAAATGTGGTACCAACATGTGTTTGTTGAGTGGCACAAGCACACCAGTTTCAACAACAACAACAACCACCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCTTCTAGGGAACTCAATCTTGCAGAATTTGGTGTCACTGCTTCTTCAGTCACAGTGCAAAATGATCAAAATGCTGAGAATGATCAAAGGAAGCATGATCCTGATTCCAATGGATTGTCAACAAGATGTGTTGAAGAGGCTGCAGCCATTAAAATTCAATCGGTGTTTCGGTCCTACTTGGCAAGAAAGGCACTGTATGCTCTTAGAGGACTAGTGAAGTTGCAGGCACTAGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTGAGATGCATGCAGGCTTTAGTCATAGCACAATCCAGGGCTCGTGCTCAGAGGGCGCGAATGGTGTCAGACGGAAAACTTGATCAAAAGCTATCACCCAACAGAATAACCACAGAGGAAAACTTCTCCATGCATATGTATAATGAAATGCACAATGGTTTGGAGGAGAATGCCATGATAGTGGAGATGGCTGTTTGTGAATCCAAAGGTAACTCAAGAGGCAGAAACAGTTCTGTGAATCGTGAACCTTCTGATCATAGATTTTCTGCATATTATTCATCAAACGGTTCATACTCAAAGGAGGAAAACTACAATGCATCACCTGCACCATCAACACTGACAGAATTGAGTCCAAGAGCATGCAGTGGTCATTTTGAGGAGTGTTCCTTCAGCACAGCACAAAGTAGTCCCTATTACTACTCAGAAGTGTCAGGAGTGGATAATACAATTACAAAGGTTCCTTTTGCATTCCCTATACCAGCATACACAGAACCCATGTCCTATGACTACCCTTTATTTCCAAACTACATGGCCAACACAAAATCATCAAGGGCCAAAGCCAGATCACAGAGTGCACCAAAGTCAAGGCCGGATTCGTACGAGAGGCAACCGAGCCGACGAAGAGCTTCAATGGAAGGAAGAAATGTCCCAAAGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTCACTGCCCAAAACTACCAATATCCATGCTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCCACAAGTACAGTGCTCACAAACACAAACTCTAATTACTGCACATGA 1254 0.445 MGRTGKWLRNLLTGKRSDREKEKEKCGTNMCLLSGTSTPVSTTTTTTKEKRRWSFRRSSASRELNLAEFGVTASSVTVQNDQNAENDQRKHDPDSNGLSTRCVEEAAAIKIQSVFRSYLARKALYALRGLVKLQALVRGHLVRKQARETLRCMQALVIAQSRARAQRARMVSDGKLDQKLSPNRITTEENFSMHMYNEMHNGLEENAMIVEMAVCESKGNSRGRNSSVNREPSDHRFSAYYSSNGSYSKEENYNASPAPSTLTELSPRACSGHFEECSFSTAQSSPYYYSEVSGVDNTITKVPFAFPIPAYTEPMSYDYPLFPNYMANTKSSRAKARSQSAPKSRPDSYERQPSRRRASMEGRNVPKPVRMQRSSSHVGVTAQNYQYPCSIKLDRSIVSECGSTSTVLTNTNSNYCT 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00043 417 MobiDBLite consensus disorder prediction 1 25 - -
Gma02g00043 417 Gene3D - 104 156 - -
Gma02g00043 417 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Gma02g00043 417 MobiDBLite consensus disorder prediction 84 98 - -
Gma02g00043 417 MobiDBLite consensus disorder prediction 348 363 - -
Gma02g00043 417 Pfam IQ calmodulin-binding motif 131 147 IPR000048 GO:0005515
Gma02g00043 417 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Gma02g00043 417 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Gma02g00043 417 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 405 - -
Gma02g00043 417 MobiDBLite consensus disorder prediction 330 347 - -
Gma02g00043 417 MobiDBLite consensus disorder prediction 77 98 - -
Gma02g00043 417 Pfam Protein of unknown function (DUF4005) 296 364 IPR025064 -
Gma02g00043 417 MobiDBLite consensus disorder prediction 330 377 - -
Gma02g00043 417 PANTHER IQ-DOMAIN 5-RELATED 1 405 - -
Gma02g00043 417 SMART iq_5 126 147 IPR000048 GO:0005515
Gma02g00043 417 SMART iq_5 103 125 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00043 Gma-Chr2 516972 519918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00043 1 412 IQD Protein Family AT4G14750 45.067 2.22e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00043 - - gmx:100810189 791.571