Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00041 ATGGCCAACAACTTTTATAACAATGCACAATTCTCTAAACTTTATAACAACCCAGACCCAAAAGGATGCAAGTTGTGCAACCAAGTTTTCACCAACACTCAGGCCCTTCTAACCCATGTTGAGTCTCACATGGCACAAGAAAAGGATGTAGTTAGAAGGCTTAATTCATCACCACCTCAACATGTCAATTCTCAAATACAATTGGGTTCACATCAATTCCCACCACCACCTACGATGGATGATATCAGGATTTTCCAATCACAATCACAACTTATGGGGATGCCTCAACCAATTAGTAGAAACCCATTTTTCAATTCTAACCAAATTGGTTCATCATCATCATCATCAATGCCAATCAGGAAAATGCAAGTTCTACCACATGCTTTTCCTTATGTTGGGAATATTAATGGTGATGGCTTTAAGGCATTTATCTCAAATTTGGAGAAACCCATCAAGAAGATTGATTTCATTGATTTGGTTAACGTGGATGATGACAACAACTCAGACGTGGAAGTAATGGATTTGGATCTAAAGCTCTAG 540 0.3833 MANNFYNNAQFSKLYNNPDPKGCKLCNQVFTNTQALLTHVESHMAQEKDVVRRLNSSPPQHVNSQIQLGSHQFPPPPTMDDIRIFQSQSQLMGMPQPISRNPFFNSNQIGSSSSSSMPIRKMQVLPHAFPYVGNINGDGFKAFISNLEKPIKKIDFIDLVNVDDDNNSDVEVMDLDLKL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00041 179 ProSitePatterns Zinc finger C2H2 type domain signature. 23 43 IPR013087 -
Gma02g00041 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 21 48 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00041 Gma-Chr2 498604 499143 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma02g00041 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00041 - K09228 pvu:PHAVU_007G277300g 145.976