Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00039 ATGCGTGTGTTCCTCAACTCAACACACTCCTTTATAATTGCAGCGTCGACAAAAACCCTAACTCCTAACCTTTTTTTCTTCCTTTCACCTCTTCAGCAGTCGTTACAGAGACTCCATAACCCGAAAATGCCTTTCAAGAGGTACGTTGAGATTGGAAGGGTTGCTCAGATCAACTATGGCAAAGAGTATGGGAGGCTCGTGGTTATTGTCGATGTCATTGACCAGAATAGGGCTCTTGTTGATGCTCCTGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTATCACTCACTGACATCAAGATCGATATTAAGAGGATCCCCAAGAAGAAGGATCTCATTCAAGCCATGGAGGCTGCTGATGTTAAGAACAGATGGGAGAAGAGTTCTTGGGGCAGAAAACTGATTGTGCAGAAGAGGAGGGCATCCCTTAATGACTTTGATAGGTTCAAGATAATGTTGGCCAAGATCAAGAGGGCAGCTGTTGTTAGGCAAGAGCTTGCTAAGCTGAAGAAAAGTGCATCATAG 528 0.4489 MRVFLNSTHSFIIAASTKTLTPNLFFFLSPLQQSLQRLHNPKMPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRIPKKKDLIQAMEAADVKNRWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAAVVRQELAKLKKSAS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00039 175 SUPERFAMILY Translation proteins SH3-like domain 47 135 IPR008991 -
Gma02g00039 175 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 43 174 - -
Gma02g00039 175 Gene3D - 134 169 - -
Gma02g00039 175 Gene3D - 43 126 IPR014722 -
Gma02g00039 175 PANTHER 60S RIBOSOMAL PROTEIN L14 43 174 IPR039660 GO:0003723|GO:0003735
Gma02g00039 175 CDD KOW_RPL14 49 121 IPR041985 -
Gma02g00039 175 Pfam Ribosomal protein L14 87 159 IPR002784 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00039 Gma-Chr2 480165 482261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00039 43 175 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 81.955 1.52e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00039 K02875 - gmx:100817659 246.514