Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00009 ATGGATCGCTTTTTTCCTGAGAAAATTCTCGGTGAGATTTTCTGGGATGAACCTTTTTTGGCCACTGATCAAAGTGATTTAGTTCAATATTCCCAGATTAACAAGGCTGAAGCTTCCCCTCCTGCAGCAACTCCAAGCGCTTTTGTTCAATATAGAGACCTACCCAGAAGAATTAATTCTCTAAACGGGTCAAATTCCCAGATCATGAGTAAGAAAATGCTTGCGTTCTTGAGAAAAAGTTGGCCTTGGCCTGTGGAGAGAAATAACGTACAAGAGAATGAGAGAAACCGTAGTTTCAGGCACATGATCAACGAAAGAATGAGAAGACAGAGGCAGAGGCAGTGTTGTTTGGCGCTGCATTCAATATTACCACAAGGAACAAAAACGGATAATAATTCTGTAATTCAAATGGCGGCAAAGGAGATTGTACGGCTACAAGGATGCAGAGAAGAGTTGCAAAGGAAAAATGTTGAGCTTGAAGCAAATCTTGAAGGTGTTGAGAGCAGCAAAGGTAGCGGAAGTAAAGTTCAATATTTGAGAGTTCCACATCCTAAGTCTGGAATTGATTCTATGGTTGAGATCCTCAAATGCTTGAAAGACAAAGGAGTCGATACCAGAAGCATCAAATCAACTTTCTCCCCACAGGAGTTGTTTGCAGTGTTAGAGACAGAAACTGATGAGGTAGCACCTTCTGAATAG 699 0.4134 MDRFFPEKILGEIFWDEPFLATDQSDLVQYSQINKAEASPPAATPSAFVQYRDLPRRINSLNGSNSQIMSKKMLAFLRKSWPWPVERNNVQENERNRSFRHMINERMRRQRQRQCCLALHSILPQGTKTDNNSVIQMAAKEIVRLQGCREELQRKNVELEANLEGVESSKGSGSKVQYLRVPHPKSGIDSMVEILKCLKDKGVDTRSIKSTFSPQELFAVLETETDEVAPSE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00009 232 Pfam Helix-loop-helix DNA-binding domain 100 146 IPR011598 GO:0046983
Gma02g00009 232 PANTHER TRANSCRIPTION FACTOR BHLH92 1 226 - -
Gma02g00009 232 Coils Coil 135 169 - -
Gma02g00009 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 161 IPR036638 GO:0046983
Gma02g00009 232 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 226 IPR044658 -
Gma02g00009 232 Gene3D - 86 162 IPR036638 GO:0046983
Gma02g00009 232 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 145 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00009 1 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 36.052 4.08e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00009 - - gmx:100815874 426.402