Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02453 ATGGTGAAGGAGACCGAATACTATGACGTGCTGGGTGTCAGCCCTACGGCATCCGAAGCCGAGATTAAGAAAGCTTATTACATTAAGGCACGGCAAGTGCATCCAGATAAAAACCCAAATGACCCTCTTGCTGCACAAAATTTTCAGGCAAGAATGTTATGTGAGGCTTACCAAGTTCTGAGTGACCCAGCTCAAAGACAAGCTTATGATGCTCATGGAAAATCAGGAATTTCAACTGAAGCAATTATTGATCCTGCAGCAATCTTTGCCATGCTTTTTGGTAGTGAGCTTTTTGAGGAATATATAGGTCAGTTAGCCATGGCATCAATGGCTTCAATGGACATCTTTACTGAAGGAGAACAATTTGATAGTAAAAAGTTGCAAGAGAAAATGAGGGTTGTTCAGAAGGAGAGAGAAGAAAAGCTTGCAGAGATACTGAAAAATAGACTCAACCAATATGTTCAAGGAAACAAAGAGGGTTTTGTTAATGATGCAGAAGCTGAAGTAGCCCGGCTATCTAATGCAGCTTATGGGGTTGATATGTTGAATACCATTGGGTACATATACGCAAGGCAGGCAGCAAAAGAGCTAGGGAAGAAAGCAATTTATTTGGGTGTGCCTTTTATTGCTGAGTGGTTTAGAAACAAAGGGCACTCTATTAAATCTCAAGTTACAGCAGCAACAGGTGCAATTGCTTTAATCCAATTGCAGGAGGATATGAAAAAGCAACTCAGTTCAGAAGGGGACTATACTGAAGAAGAGCTTGAAGAATACATGCAAAATCACAAGAAATTAATGATTGACTCATTGTGGAAGCTTAATGTGGCAGACATTGAAGCCACTCTTTCCCGCGTTTGTCAAATGGTTCTTCAAGACAACGGTGCCAAGAAAGAAGAACTCCGCGCTCGAGCTAAAGGGTTAAAAACTCTTGGTAAAATCTTCCAGAGGGTTAAATCAGCCAATGGAAACGAGAATGAAAGTGTACCAAATAAGGCAGTACACAAGTTGAATGGAAGTGAAACTGGCAATGATACTTCTCCTAGTACATCACCCAAATCTTCAAGTCCTGATTTTTCGTCTCAGAGCCCCTACGTGGAGGCCCCGCGCTTTGCTGGCATGCAATTTGATTATAATTTCCCTAGGCCAACCGCCCCCCCGGGTGCCCAGAGACCTACTTCAACCAGCAAGGATTGA 1194 0.4246 MVKETEYYDVLGVSPTASEAEIKKAYYIKARQVHPDKNPNDPLAAQNFQARMLCEAYQVLSDPAQRQAYDAHGKSGISTEAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFTEGEQFDSKKLQEKMRVVQKEREEKLAEILKNRLNQYVQGNKEGFVNDAEAEVARLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHSIKSQVTAATGAIALIQLQEDMKKQLSSEGDYTEEELEEYMQNHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNGAKKEELRARAKGLKTLGKIFQRVKSANGNENESVPNKAVHKLNGSETGNDTSPSTSPKSSSPDFSSQSPYVEAPRFAGMQFDYNFPRPTAPPGAQRPTSTSKD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02453 397 SUPERFAMILY Chaperone J-domain 2 103 IPR036869 -
Gma01g02453 397 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 367 - -
Gma01g02453 397 Pfam X-domain of DnaJ-containing 135 326 IPR026894 -
Gma01g02453 397 Gene3D DnaJ domain 1 86 IPR036869 -
Gma01g02453 397 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Gma01g02453 397 PANTHER CHAPERONE PROTEIN DNAJ 10-LIKE ISOFORM X1 1 367 - -
Gma01g02453 397 MobiDBLite consensus disorder prediction 321 397 - -
Gma01g02453 397 Pfam DnaJ domain 6 70 IPR001623 -
Gma01g02453 397 SMART dnaj_3 5 65 IPR001623 -
Gma01g02453 397 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gma01g02453 397 PRINTS DnaJ domain signature 65 84 IPR001623 -
Gma01g02453 397 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gma01g02453 397 PRINTS DnaJ domain signature 45 65 IPR001623 -
Gma01g02453 397 Coils Coil 124 144 - -
Gma01g02453 397 Coils Coil 241 261 - -
Gma01g02453 397 MobiDBLite consensus disorder prediction 321 362 - -
Gma01g02453 397 CDD DnaJ 6 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02453 Gma-Chr1 59149780 59176663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02453 7 72 C2H2 Transcription Factor Family AT1G74250 42.254 8.18e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02453 - - gmx:100780905 734.561