Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02444 ATGGGCATCACGTACATGTGCGCTTTAATATTATTGTCATTATTGCTTCATTCATTTATGTTCATTGCGGCAGATCAACGGGTGGCCGGATTGGAAACTATCATAGCAAGTGGCCACGTGCACGGGGGTAATTTTTATGGCTCTCCTCCACCACCTCCCCCCGAGTGTCACCCACCCCCTCCAATGTGTCCTCCACCTCCACCTCCGCCACCCGTACGGCTGGAGAGAGCTCGCAAAGCGCTTATCAAATTCACTCGTTTGGTGGATGACCCAAATGGATATACGAGTAACTGGAAGGAGGGTAGAGACACTTGTGAGTTCAGGGGGGTGCGATGTGCAAAATATCCAGACGGACAGCAAGCAGTTGCGGGATTAGACCTGAATGGAGCTGGCCTCTCTGGAAAAAAATGTACAGCGCTCATGCTCACCGGCATCTTGGACAGCATACCCGAGCTCACTTTCTTCCACGTCAACTCCAACAACTTCAGCGGTGCCATCCCAACCGACATCATCAAGTACAAATTTTTCTTCGAGCTAGATCTCAGTAACAACAAACTGGAGGGTGAGTTCCCGAAGGAAGTGCTCCGGCCCAAGCCCAAGGACCAGCAGCTGGTGTTCCTTGACCTCAGGTTCAACAGTCTCTGCGGCCCAATTCCACCGCAGCTCTTTGACTTGGATCTGGATGTGATTTTCATCAACAACAATAAGTTCAGTGGCCATCTCCCCGATAACTTTGGGTCCACACCGGCCAGGTACCTCACTTTTGCCAACAACCAGCTCACGGGCCCAATCCCGGCAAGCATTGGCAAAGCCTCCAAAACCCTCACCGAAGTCCTCTTCTTGGGCAATCACTTCCAGGGTTGCTTGCCCTACCAAATTGGCTACCTCGATAAGGCTACCGTCTTTGATGTCAGCAAAAACTCCTTAACGGGTCCCATCCCACACTCCTTTGCCTGCCTGCAAAGCATCCAGTACCTCAACTTGGACCGCAACCAGTTTTACGGAGAGGTTCCTGAGATGCTGTGTCTTCTCCCTGGCCTCCGCAACAATGGGAACCTCTCCTTATCCGACAACTATTTCACTCAGGTTGGCCCTGCATGCAGGAACCTTATCAAAACCAATGTGCTGGACGTCAGCTACAATTGCATTCTGGGGCTTCCAAATCAAAGGCCGCACGGACAATGCACAGAATTCTTCTCCAAGATCAAGCCCTGCCCAAATCCAAAGTATCTCCATTACGTCCCTTGTAAAGGATACTACCCGCACACCCACCCCGCCGCCACTGCCACTCCTCCGCTCACTTACAACTCTCTCAACCCCCATCATCTTCATCGCTAG 1338 0.5172 MGITYMCALILLSLLLHSFMFIAADQRVAGLETIIASGHVHGGNFYGSPPPPPPECHPPPPMCPPPPPPPPVRLERARKALIKFTRLVDDPNGYTSNWKEGRDTCEFRGVRCAKYPDGQQAVAGLDLNGAGLSGKKCTALMLTGILDSIPELTFFHVNSNNFSGAIPTDIIKYKFFFELDLSNNKLEGEFPKEVLRPKPKDQQLVFLDLRFNSLCGPIPPQLFDLDLDVIFINNNKFSGHLPDNFGSTPARYLTFANNQLTGPIPASIGKASKTLTEVLFLGNHFQGCLPYQIGYLDKATVFDVSKNSLTGPIPHSFACLQSIQYLNLDRNQFYGEVPEMLCLLPGLRNNGNLSLSDNYFTQVGPACRNLIKTNVLDVSYNCILGLPNQRPHGQCTEFFSKIKPCPNPKYLHYVPCKGYYPHTHPAATATPPLTYNSLNPHHLHR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02444 445 SUPERFAMILY L domain-like 76 387 - -
Gma01g02444 445 SUPERFAMILY Formin homology 2 domain (FH2 domain) 49 54 - -
Gma01g02444 445 Pfam Leucine rich repeat N-terminal domain 77 112 IPR013210 -
Gma01g02444 445 Gene3D Ribonuclease Inhibitor 141 399 IPR032675 -
Gma01g02444 445 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 428 - -
Gma01g02444 445 Gene3D Ribonuclease Inhibitor 73 140 IPR032675 -
Gma01g02444 445 PANTHER BNAC05G26270D PROTEIN 9 428 - -
Gma01g02444 445 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02444 Gma-Chr1 59055921 59057431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02444 73 405 Trihelix Transcription Factor Family AT1G12040 39.763 7.76e-72 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02444 - - gmx:100781083 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02444 01 59055921 59057431 Gma11g00006 11 30525 31999 GST