Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02423 ATGAGGGGCGGTGAGGAGCGATCGACAGGGATTCGAAAGAAGGGAAGCGGAGTGAGACAATGGCTGGTCCTGGACGGCAGAGGAGAGACGGAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGAGGACGGGACTCCCCGCGCGTGACCTGCGTATATTGGACCCTCTCTTGTCATACCCTTCTACCCTTCTGGGTCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCTCGCGACCCCTCCGTCACCCCCTTCCTTCAGGAGCTCCAGGCCAGGATCCTCCGCCACCACCACCAGACTCTGGCCGATGCCAACCCCAACCCTGACGACGCCATCAAGATTCTCCCCTTCGAGTTCGTAGCCCTTGAGGCCTGTCTGGAGGCCGCTTGTAGCGTCTTGGAAAACGAGGCTAAGACTTTGGAGCAGGAGGCTCATCCGGCCTTGGACAAGCTCACCTCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTCGCCATCACTGGCCGTGTTCAGAAGGTCAGGGACGAATTGGAGCACCTGCTCGACGACGACGATGATATGGCTGAGATGTATCTCTCTGAAAAGCTAGCCGAACAAGATGACTTGGAGAAGGCGGAGGATACCACTTCTGCCGACGATGTTGATGATCACATTGACAGGACCGCTCCTGAAATATCGTTGGACAATGTTGTTGGTAGGGACAGCCATGGAACTCGCGATAGCGCCACCTACAGCGCCGTCACCAAGCAACTTGATGTCGAGGAGCTTGAGATGCTCTTGGAGGCTTACTTTGTGCAGATTGATGGCACCTTGAACAAGCTCTCTACGCTGAGGGAGTACGTTGATGACACAGAGGATTACATCAACATCATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGAAAGCTGGGATGACACAATTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTATGAGTTTATGCAGATAATTGATAAGAAAAAAAATGATACTTACACAAATATTCGAGTTTGTGGAGTGCATCGCATTCTCTAA 1167 0.5296 MRGGEERSTGIRKKGSGVRQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFLQELQARILRHHHQTLADANPNPDDAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLSEKLAEQDDLEKAEDTTSADDVDDHIDRTAPEISLDNVVGRDSHGTRDSATYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLKAGMTQFLWTVGGSTAGTIFLYVVAIAWYEFMQIIDKKKNDTYTNIRVCGVHRIL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02423 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 118 IPR039204 -
Gma01g02423 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 125 333 IPR039204 -
Gma01g02423 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 334 367 IPR039204 -
Gma01g02423 388 MobiDBLite consensus disorder prediction 218 238 - -
Gma01g02423 388 Coils Coil 138 158 - -
Gma01g02423 388 Gene3D Magnesium transport protein CorA, transmembrane region 95 321 - -
Gma01g02423 388 PANTHER - 9 118 - -
Gma01g02423 388 PANTHER - 125 333 - -
Gma01g02423 388 PANTHER - 334 367 - -
Gma01g02423 388 CDD Mrs2_Mfm1p-like 21 367 IPR039204 -
Gma01g02423 388 Gene3D - 7 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02423 Gma-Chr1 58926267 58929744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02423 21 369 MRS2 Gene Family AT3G19640 58.219 1.49e-160 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02423 - - gmx:100819578 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02423 01 58926267 58929744 Gma11g00020 11 117021 119108 GST