LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma01g02404	ATGCCACCGCAACAGTTCTCAACACAGGCAAAGACGTGGAGGTTGTTCATAGATGAGATTCTAATCTCAGCCAGTGGAGGAAATCTAATAGATGGAACTGACTTCCCTGCTTTGATAGGAAATGGCATTACCTTTGTTGGATCTTCTGTGCCAGATTTGGATAGCTCCATCAACACAGCTCAAGATTTATCCCAAATTTCAGCCATGATCCAGCTTATTGGCACCCAGTTTAGAGTAAATCCTCCTACAATTCCTATGCCTAAAACCATAAAGTTGGTAACTGATGGTTACAATTGCCCCCAACCAACTACCCGTAAGGATTCCATGCATGCGTGTTGTAAAAAAGACCCTAAATTCAAGGCTACACTGAGGAAGACAAAATTCTTTCCACGGCAAAAAGGGGATCTTACCATATCCTACGACGTGAATCAAGTGTATGAGAATAATTATATGGTAGAGGTGACCATGGAGAATAATCACCTTTTGGGACGGCTGGACCATTGGAACTTGACTTGGGAGTGGACAAGAGGGGAATTTATATACAGTATGAAAGGTGCTTTCACATGTGTGATAGAATACTCAGATTGTATCTATGGTGCTGCAGGACAGTATTATAAGGACATGGATTTCTCTAAAGTCGTTAACTGTCAAAAGAATCCAATAGTCAGTGACTTGCCTCCGGAGAAAGCTAATGACACTGAAATTGGAAAGATACCTCACTGTTGCAAAAACGGAACTATTTTACCTATCCATATGGATCCAAGCAAATCCAAGTCTGTCTTCCAAATGCAAGTGTTCAAAGTTCCACCTGATTTAAACAAAACAGCAATTTACCCTCCAGAGAAATGGAAAATAATGGGCATTCTAAACCCGGATTACAAAAGTGGGGCACCTATTAGAGTGGATCCTGCATAA	915	0.4109	MPPQQFSTQAKTWRLFIDEILISASGGNLIDGTDFPALIGNGITFVGSSVPDLDSSINTAQDLSQISAMIQLIGTQFRVNPPTIPMPKTIKLVTDGYNCPQPTTRKDSMHACCKKDPKFKATLRKTKFFPRQKGDLTISYDVNQVYENNYMVEVTMENNHLLGRLDHWNLTWEWTRGEFIYSMKGAFTCVIEYSDCIYGAAGQYYKDMDFSKVVNCQKNPIVSDLPPEKANDTEIGKIPHCCKNGTILPIHMDPSKSKSVFQMQVFKVPPDLNKTAIYPPEKWKIMGILNPDYKSGAPIRVDPA	304

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma01g02404	304	Pfam	COBRA-like protein	150	303	IPR006918	GO:0010215\|GO:0031225
	Gma01g02404	304	PANTHER	COBRA-LIKE PROTEIN 7	9	304	-	-
	Gma01g02404	304	PANTHER	COBRA-LIKE PROTEIN 7	9	304	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma01g02404	Gma-Chr1	58780516	58782174	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma01g02404	9	304	COBRA Gene Family	AT3G20580	56.146	1.38e-119	356

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma01g02404	-		-	gmx:100799716	563.148