Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02361 ATGGATTCGGAAGGCGAGGGTGTTAGGACACCAAAGATGGGAGTGGAAGCAGAAGGGGCTCTGAATTCAAAGATGAAAGGTGCTGGAAACGTGAGCAGTAAGGATATGATTTTCAGAGCTGATAAGATTGATCTCAAGAGTTTGGATGCACAGCTGGAAAAGCACTTGAGCAGGGTTTGGTCGAGGAGCATTGAGACTAAACGGCCTAGAGAAGAGTGGGAGATTGATTTGGCCAAATTGGATCTGCGATATGTTGTGGCTCATGGGGCATATGGTACTGTATACAGGGGTACATATGATACCCAAGACGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTAGCTACTGCTGCTGAAACTGCTGCTTTGCGGGCATCTTTTAGGCAGGAGGTTGCTGTCTGGCAAAAACTTGACCATCCAAATGTGACAAAATTTGTTGGAGCTTCAATGGGTACTTCAAATCTTAAGATTCCGCCAAAAAACCCTATGAATGCCGATGAAGAGTCCCTTCCTTCTAGGGCATGCTGTGTTATTGTTGAGTTTGTCTCTGGTGGGACACTAAAGCAATATTTGTTTAAAAGTAGGAGGAGGAAACTTGCTTATAAGATTGTGATTCAGCTGGCTTTGGACCTTGCTAGGGGTCTTAATTATCTACATTCAAAGAAGATTGTTCACCGAGACGTTAAGACAGAGAATATGTTACTAGATACTAGTCGGAATCTAAAAATAGCTGATTTTGGAGTTGCTCGGGTTGAAGCTATGAATCCAAGTGACATGACTGGTGAAACTGGAACCCTAGGATATATGGCTCCAGAGGTTCTGGATGGAAAACCTTACAACAGGAGATGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGATATGCCTTATCCAGATCTAAGCTTTGCTGACGTGTCATCTGCAGTTGTTCGCCAGAATTTACGACCAGATATTCCGAGATGTTGTCCAAGCGCCTTGGCAAATATCATGCGGAAATGCTGGGATGCAAATCCAAACAAGCGTCCAGAAATGGAAGAGGTGGTGAGGATGCTGGAAGCACTTGATACTAGCAAAGGTGGTGGTATGATACCTGAAGATCAGAGTTCAGGAGATGTGATGTCTAAGATTATGGCACTTCCTGAGGGTGTTCAAGTTCATGGGGCGGTTGTTAAGATGGGTTTGGAGGGAGAAATCTTTGTCAGCAACTCTTTGATACATTTCTATGAGGAGTGCGGGAGAGTTGACTTGGGACGAAAGATGTTTGAAGGAATGCTTGAGAGAAATGTTGCGTCTTGGACTAGTTTGATCAATGGTTATGCTGGGAGGCTGTTTCTCTTTTCTTTCAAATGGTTGAGGCTGGTGTTGAACCCAATCCGGCTACCATGA 1407 0.4435 MDSEGEGVRTPKMGVEAEGALNSKMKGAGNVSSKDMIFRADKIDLKSLDAQLEKHLSRVWSRSIETKRPREEWEIDLAKLDLRYVVAHGAYGTVYRGTYDTQDVAVKVLDWGEDGVATAAETAALRASFRQEVAVWQKLDHPNVTKFVGASMGTSNLKIPPKNPMNADEESLPSRACCVIVEFVSGGTLKQYLFKSRRRKLAYKIVIQLALDLARGLNYLHSKKIVHRDVKTENMLLDTSRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPRCCPSALANIMRKCWDANPNKRPEMEEVVRMLEALDTSKGGGMIPEDQSSGDVMSKIMALPEGVQVHGAVVKMGLEGEIFVSNSLIHFYEECGRVDLGRKMFEGMLERNVASWTSLINGYAGRLFLFSFKWLRLVLNPIRLP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02361 468 CDD STKc_MAP3K-like 86 358 - -
Gma01g02361 468 Gene3D Transferase(Phosphotransferase) domain 1 186 377 - -
Gma01g02361 468 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 381 - -
Gma01g02361 468 SMART serkin_6 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02361 468 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Gma01g02361 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Gma01g02361 468 PRINTS Tyrosine kinase catalytic domain signature 329 351 IPR001245 GO:0004672|GO:0006468
Gma01g02361 468 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Gma01g02361 468 PRINTS Tyrosine kinase catalytic domain signature 181 194 IPR001245 GO:0004672|GO:0006468
Gma01g02361 468 PRINTS Tyrosine kinase catalytic domain signature 219 237 IPR001245 GO:0004672|GO:0006468
Gma01g02361 468 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 8 381 - -
Gma01g02361 468 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 404 438 IPR002885 -
Gma01g02361 468 SUPERFAMILY Protein kinase-like (PK-like) 59 358 IPR011009 -
Gma01g02361 468 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02361 468 Gene3D Phosphorylase Kinase; domain 1 69 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02361 Gma-Chr1 58493497 58497412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02361 1 377 MAP Kinase Kinase Kinase AT3G22750 76.720 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma01g02361 PK_Tyr_Ser-Thr 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02361 - - gmx:100803917 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01392 20 40995052 41003190 Gma01g02361 01 58493497 58497412 PCT