Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02343 ATGATTCAGAACATTGATATGAGACTTGAATCGGGAACTTGCAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCATGGGGTTAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCATAGGAGAGGCTAATTCTATGGATGAGGATAATGAATATTCTCTTAGGAGCAGAGCTTGTGAAAGCTCACAGCACACTGTCAGTGAAGCAAGTAATATGCAGAGTGTGAATTCAAGTCATGACGCACTGTCTGAAAATGCTGACAGTAGACAGATCATACTGAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCTTGATGACAACACTTCTTGTATTAGTAGAGCCAGTGATGCTAATTTAGTGAACGATAGCCATCAAAGGAATGAAGAGAGAATAATAATGAATGTGGAAAGGGATTCATTTTCTCATGTCCCAGAAAAGTTGTCAGAATGCTCCATTGAGAATTCTAGTTCATCATTGACCAAAGAGAGGGAACCTGTTGTTTCTGGCGAGAAATATATTGCTGTTATTGAGAGTACTTCTAAGATTTCACTAAAAGTATGTCCTAAGTCAGAAGCAGATACTGATGTCTGTGATGCTAACAATGAAGATCCTAAATATGCAGTTCAAGACGGACAGTGTGAGAAAGCTCAAGAGCTGGTTAAATCCCCTGGCAAGCAGGAACCTCAATCTGATGACGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAAGTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAAGATGCAGAGGAGAATGAAAATAAAAGACTGGATGTTGACGACAAAAAAATGGTTGAAGTTAGTTCAACCTCACAAGTTTCTGGCAAAAGACTCTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGTATAGGATCACCAAAGACGTCAAGTCCCAAGAGATTAGTTCCACTGTCCCGAGAATCTTCATTTAAGAGCTTAGATAAATCAAAAGTGAAGCCTGGTCTTCTGATGCCTATTCGAAACCACTCTGGTGGTATTGATACAGAGATTGCTCGCTCTCCTTCCATTGGTCCCCGGGGTCAAAATCCAAAAGGTATGCTGTTGAAGTCTAATTCATTCAACAACTTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCCCCCAAAAAAAGGGGGTAATGAACATACTTCAAAGAACATGGAGATGCCTGCTCGGGTGACTGGAAAATCTACATTATTCAAATCCTCAAGTTTGGGGCGATCAAATGCAACTGAATCAAAAGTGAAAATGCTTTCGCCAAAGTCTGCAACTACTCAGGATTTGAAAGGATCTAGACATCTAAAAGAATCAGGTGCATTTGACAGGAAATTTCCATCTAGGATTGATCGTCCTGTGGCTAGTTTGGTTGTTTCCACTCCTAAGGGTGATCAAAAGCTTACACCTCATGCTGAAAGCAGTAAAGCTTCAGCAATGAACAACAATCGAGAGTTGAAGGTTAACCAGGATGGAAAATCATGTGCATTACCAAGGTCAATGAGTAATATAAGCCGGAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGAACATCAACCCGTGTTGATGAAACTCAACAGGATGTGCTGTCTCAATCACGGGAGACAGCAAATCAGGTTGAGAGAAGCAGAGATAGTTCTAGTGATCGTGGAAGGCCAGCTGTTCCTACTTCAAAAAACCCATTATGTCAAAAATGTAAGGAATTTGGCCATGCTTTGGAATGTTGTACAGCTGGTTCTACACAGGAATCTGGTGCTGAAATATCTGTCACTGCCTCGAGTAGTTCAAAAGAGGAGATGCATAAAGACAATATATTGAAAGTTGCAATCCAGGCTGCTTTACTCAGAAGGCCTGAAATTTACAAGAAGAAAGAAGTATCTTATCAAACTGACGAGGTTTCTACCTCAGGCACAGAGTTGAATTGTGAAGTGACTTCAAAAGACCAAGTTTTGGTTTCCAGCACACTGAAGAATAGCATATCTGCTGATGAAACCCAAGAACAACAAGAAATCCTTGAGAATTCTACCTCAGATTCTTCCAAATGTTCATCTGCCAATGATTTGAAGCAACTTAACTCTTGTCCAACTGACTTTCGGTCCAAACCAGGAAAGTCAGATTCCATTGGTCTTGCAGCTGGAAAGCCTGTAGTGAGAGACTTGTCTGATAAAGCTGTGACAATGTCCAGTGTTCCTTTGAAGATGTTGGCCTTTCCTGAATATGAATACACCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTTATATACTGGATTTCAGGCACATCTATCCTCTTGTGCTTCTCCTAAGGTTCTTGGGGTAGTGAACAAGTTTCTACCCAAAGTTTCCCTCAGTGAAGTTTCTCGCTTGAGCATGTGGCCTTCACAATTTCTTCATGGTGGTGTTAGTGATGATAATATTGCTCTTTACTTCTTTGCCAGGGATGTTGAAAGTTATGAGAGACACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAAATTTTGATGGTGTCCAACTGCTGATATTCCCTTCCAACCAGCTTCCTGAAAATTCGCAGCGCTGGAATATGTTGTTTTTCTTATGGGGCGTATTTAGGGGGAGGAGGATCAATCATTCAGATTCTGCAAAAAAGATTTGTATTTCCAGTTTGAATGTAATGCCAGTTGAGGAGAAATCCTCAACTGCCATTTTAACTATGCCTGAAACACATTGTTTGCCAAAGTGCAAGGATGAAGAATCAAATGATTGTGATAAAGTATGCAATGCATTTCTCCCATCCACTTCCAGAGACCAACATCAGACTAGTGGAAGTAGGAATGTTGATGTCAATGACCAGACACATTTGGGTTCACAAGTAAACTTAGAGAAGCTAGATAGTAGGATTGACTCAAAATCTACATCAAGGGTTCCAACAAGCAGTACTCTATTATGTCAAGAAATGAACTCCACTGTTTCATCCCTGAAAGTTAGTGTCCTTGAACAAGAACAGTGCAGAGAGTCTAAACCTCCTGAAGCAATGGGAAGAAGTGCAAGTACTAGGATTGTGGAAACAAAAACTGATTCTGATATTTCTGTCAAGCAAGAGAACACTTTGTCTTTGATTCCTTCTCAAAAagttgctgcaagcaatattggtaaagatacaatttcagagaaaataaacagtgatgaagaccagcagaggcctaagaagaaactagaagaggattgtccctatattgatttggaggcaaatattgatgatcaagaaacagttgctgcaagcaattttagtaaggataaaaattcaggaacaattattgttgatgaagatcagcaaaggcccaagaggaaacagaaagataatcattatattgacttggaggcaacacttgaagatcaagaaacaggtgctgtaagcaatatatatgaggataaaatttcaagaaaaatggacgttgaggaagattggcgatggcttaagaggaaacagaaagatgatcactatattgacttggaggcaactTTTCATGAAGACCCAAGTGTAGAAGGGATCAACTGTGGGCTACCTAATGATAAAGTTCAGCATGTAGATCTTTCTGACACAATTATGCAGGGTTCTGCTGTCAGTTGTCAGAAAATACCTTGGAATGAGGGAAATGCCAAGTTAGAAGACAGAGAAAGTTCTGGCAAGAAGTTAAAGACAGGTTTCGGTGGGATTTATGGTTCTGGAGGTAGAGACTCTTTTAATGACAGTTTTACATCTCTTGGAAATAATCTTGGCTCCTGTTCTTCAGTTGAGGACAAAGGATGTGAGGAAGCTTGTGATGAGAAAATCATCCGGGAGGACTTGGGAACCCTGGAAAGAACCTTCTTTCCAGTTGGCACACAGAATATTACCAACTCGCTATCAGTGATGGATAGCATGTCAACCAAAGGGGTTGGTGAGTATGATGAAGGATTTCAAGATGGGATTCCCAATCTAGAGCTTGCCTTAGGGGGCAAAACAAAACCACCACCAGCTGCGCCTAAGGGTATGCTGCCTTTCTTAGTTGGGGCAGTAGACAGGCAAAATAACCGCTCTGATAACTTGGGAGACAGGCAGGAGGATGAAGGTGTCGCTGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTCCAATTAAGGAACAAACAAAAGCTGCAGAGCTTTTGCCTGATGGGCAGCGTGTGAACAACTCGTTTTTCCTTTTTGGGAGAAAATAA 4440 0.3775 MIQNIDMRLESGTCNVCSAPCSSCMHLNHALMGLKAEEFSDENCRIGEANSMDEDNEYSLRSRACESSQHTVSEASNMQSVNSSHDALSENADSRQIILNKYQDSKHLEGLDDNTSCISRASDANLVNDSHQRNEERIIMNVERDSFSHVPEKLSECSIENSSSSLTKEREPVVSGEKYIAVIESTSKISLKVCPKSEADTDVCDANNEDPKYAVQDGQCEKAQELVKSPGKQEPQSDDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENENKRLDVDDKKMVEVSSTSQVSGKRLSDNIEVAPAAKRQALESSIGSPKTSSPKRLVPLSRESSFKSLDKSKVKPGLLMPIRNHSGGIDTEIARSPSIGPRGQNPKGMLLKSNSFNNLNSKPRVKLVDEVVPPPKKGGNEHTSKNMEMPARVTGKSTLFKSSSLGRSNATESKVKMLSPKSATTQDLKGSRHLKESGAFDRKFPSRIDRPVASLVVSTPKGDQKLTPHAESSKASAMNNNRELKVNQDGKSCALPRSMSNISRKSLEPQVSSERTSTRVDETQQDVLSQSRETANQVERSRDSSSDRGRPAVPTSKNPLCQKCKEFGHALECCTAGSTQESGAEISVTASSSSKEEMHKDNILKVAIQAALLRRPEIYKKKEVSYQTDEVSTSGTELNCEVTSKDQVLVSSTLKNSISADETQEQQEILENSTSDSSKCSSANDLKQLNSCPTDFRSKPGKSDSIGLAAGKPVVRDLSDKAVTMSSVPLKMLAFPEYEYTWQGVFEVHRNGKPPDLYTGFQAHLSSCASPKVLGVVNKFLPKVSLSEVSRLSMWPSQFLHGGVSDDNIALYFFARDVESYERHYKGLLDHMIRNDLALKGNFDGVQLLIFPSNQLPENSQRWNMLFFLWGVFRGRRINHSDSAKKICISSLNVMPVEEKSSTAILTMPETHCLPKCKDEESNDCDKVCNAFLPSTSRDQHQTSGSRNVDVNDQTHLGSQVNLEKLDSRIDSKSTSRVPTSSTLLCQEMNSTVSSLKVSVLEQEQCRESKPPEAMGRSASTRIVETKTDSDISVKQENTLSLIPSQKVAASNIGKDTISEKINSDEDQQRPKKKLEEDCPYIDLEANIDDQETVAASNFSKDKNSGTIIVDEDQQRPKRKQKDNHYIDLEATLEDQETGAVSNIYEDKISRKMDVEEDWRWLKRKQKDDHYIDLEATFHEDPSVEGINCGLPNDKVQHVDLSDTIMQGSAVSCQKIPWNEGNAKLEDRESSGKKLKTGFGGIYGSGGRDSFNDSFTSLGNNLGSCSSVEDKGCEEACDEKIIREDLGTLERTFFPVGTQNITNSLSVMDSMSTKGVGEYDEGFQDGIPNLELALGGKTKPPPAAPKGMLPFLVGAVDRQNNRSDNLGDRQEDEGVAASLSLSLSFPSPIKEQTKAAELLPDGQRVNNSFFLFGRK 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02343 1479 MobiDBLite consensus disorder prediction 224 247 - -
Gma01g02343 1479 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 326 IPR013083 -
Gma01g02343 1479 MobiDBLite consensus disorder prediction 344 623 - -
Gma01g02343 1479 PANTHER - 7 1473 - -
Gma01g02343 1479 MobiDBLite consensus disorder prediction 492 512 - -
Gma01g02343 1479 MobiDBLite consensus disorder prediction 529 599 - -
Gma01g02343 1479 MobiDBLite consensus disorder prediction 348 363 - -
Gma01g02343 1479 SUPERFAMILY FYVE/PHD zinc finger 240 302 IPR011011 -
Gma01g02343 1479 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 1473 - -
Gma01g02343 1479 MobiDBLite consensus disorder prediction 460 491 - -
Gma01g02343 1479 SMART PHD_3 253 300 IPR001965 -
Gma01g02343 1479 ProSiteProfiles Zinc finger PHD-type profile. 251 302 IPR019787 -
Gma01g02343 1479 MobiDBLite consensus disorder prediction 412 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02343 Gma-Chr1 58382949 58391670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02343 - - gmx:100806639 2659.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02343 01 58382949 58391670 Gma11g00074 11 603219 609820 GST