Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02324 ATGGAGGAAGAGCAAGTTGATCAGTGGAAGATTGGATACCAAGGAGTTGAAAGAGACTTGCTTGAACTTTGTCCGGGACTGCCTCACTGCTCAGGAAACCCTTCTTTACTGTGTCAGAGACTGTGCAATCATGAAACGTATGTGGGAATTGCTTGGTTTCAGGGACTCCACTTTTTCAACGATATACCTGACTCAAGGATGACATTGTGTAATTGTGTTAAAGCATTTGTTTTGTTGAGCGAGAGTACCCTTGAAAATCAGAAGCGTGGGTGGATTTCCTCCAAGTCGTTGCTGTTCTCACTTGTCTCCAATTGCAATCGGCTACAACTATGGAGCCCCATAAGGCCTTTAATTTGCAGAGTCATACTATCTCACTTAAAAAAACCCCATGCTTCTCCATCTCAACTTCTCTTCCTCCGAACAATGACTTCCAAGGTTTTTGTTAAAGGTCTAGCATTTTCTACGACAGAGGAGGAATTAGCCAAAGCTTTTTCTCAATACGGCAGTGTCCTGAAGGCTAATATAATACTGAATAAAGCCAAGAATAGATCCAAAGGTTTTGGATATGTGACTTTTGCTAAAGAGGAAGAAGCATGCAAGGCACAGATTGACATGAACGGAAAGATATTACATGGACGAGTTATATATGTAGACGTGCAATTGCCTAACAAGTGA 675 0.4163 MEEEQVDQWKIGYQGVERDLLELCPGLPHCSGNPSLLCQRLCNHETYVGIAWFQGLHFFNDIPDSRMTLCNCVKAFVLLSESTLENQKRGWISSKSLLFSLVSNCNRLQLWSPIRPLICRVILSHLKKPHASPSQLLFLRTMTSKVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGYVTFAKEEEACKAQIDMNGKILHGRVIYVDVQLPNK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02324 224 Gene3D - 125 224 IPR012677 -
Gma01g02324 224 SMART rrm1_1 145 218 IPR000504 GO:0003723
Gma01g02324 224 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 146 215 IPR000504 GO:0003723
Gma01g02324 224 PANTHER TRANSFORMER-2-RELATED 133 219 - -
Gma01g02324 224 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 144 222 IPR000504 GO:0003723
Gma01g02324 224 PANTHER RNA RECOGNITION MOTIF 133 219 - -
Gma01g02324 224 SUPERFAMILY RNA-binding domain, RBD 144 222 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02324 Gma-Chr1 58221238 58227170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02324 144 219 Eukaryotic Initiation Factors Gene Family AT2G36660 39.474 2.35e-11 60.8