Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02314 ATGGGTTTCTGGGGGATTGAAGTGAAACCTGGCAAACCGTGTCCTTATCACGCTGACAATGTGCGAGGGAAGCTTCATGTTACTCAGGCTACTCTAGGCATTGGCTCATCATCGGAGAAAAGCATTCTTCAGTGCTCTTCTGGACACAAAAGTCCAGTTTTCTTGTGTTCATTGCTACCAGATAAGGTTGAGTCATGCCCTTTGAATCTTGAGTTTGACGCAGATGACTTAGTGGCATTCTCGGTTGTTGGCTCACGAAGCATCCACCTTTCAGGTTATTTTGCGGATGATGATGGGGATGATCTTAGGGATGACTATGAATATGATTCATGGGGAGAGGATATTGAAGGAACTGAGTCAGAGGAGTCGTCTGAATATGATAGTGAAGATGGATATGCTGATGACTTTATTGTTGATAGTGATACTGACATGTACCCGTCTTCGCCAATCCCAAATAGTGGAGTTGTAATTGAGGAAATAATGGATGATGATAAACCCAAAAATGGAGATGATCCAACTAAGAAATTAAAGAAAAAGAAGCATGTAGCTCAGTTGAAAGAGAAAGACAACAAAAGTTCTGAGCTTCCAATTGTTGCTAAGGGTGATACTGACCTTGTTGTGGAAAGTGAAGATGAAGATGGCTTTCCAATTTCCATTGCAGAGAAAGGTGTGTCTGTCTCTAAGACAGAAGCAGAAATGAAAGGAGAACAAGCACGTAAGAAAACTGAGAAAGCCAACAAGAAGGAAAAAGATGTTGGTCATTCTGCTAGTGTAAAACGAAAAGTTGATAGTGCTGATGAAGATGAGCCTCAGGATGGGAAAAAGAAGAAGAAAAGAAACAAGTTGAAAGATCATATTAAAGGGGGAAGTGATCATGCATCTGACAATAGCAATGAGAAAAAGGTTACTGAACCAGATGAAAAACATGCCGAGGATGTTAAAACTTCAACCAAACTGAGTGATGTTTCTCATGCAAAGGATGAAGATGGTGGAAAGCTATCCAATAACGAGGTCCTTGTTGAGAAGAAAATCAAGAAGAAAAACAAGAAAAAGACCAAAGAGTCTGAAGGGGAAGCTGCCGCAAATCAAATTACTACAACTGCTGAAAAACAGAATTTGTCCACAGAGAAAAAGGGGAAGAAACAAACTGAAACCAAGCCATCACAAGTGAGAACTTTTCCAAATGGATTGATTATAGAGGAGGTGTTTATGGGTAAACCTGATGGCAAAAAAGCTGCTCCTGGAAAGAAGGTTAGTGTTAAATATATTGGCAAACTGCAAAAAGATGGGAAAATATTTGACTCAAATGTGGGAAGAGCACCCTTTAAATTTCGCCTGGGTGTAGGACAAGTCATCAAAGGGTGGGAGGTTGGGATCAATGGGATGAGAATTGGGGACAAACGAAGGATCACAATTCCACCGTCTATGGGATACGCGGACAAACGCGTTGGCAGTATACCACCAAGTTCGTGGCTTGTATTTGATGTGGAGTTGGTTGATGTTGGTCGCTGA 1512 0.412 MGFWGIEVKPGKPCPYHADNVRGKLHVTQATLGIGSSSEKSILQCSSGHKSPVFLCSLLPDKVESCPLNLEFDADDLVAFSVVGSRSIHLSGYFADDDGDDLRDDYEYDSWGEDIEGTESEESSEYDSEDGYADDFIVDSDTDMYPSSPIPNSGVVIEEIMDDDKPKNGDDPTKKLKKKKHVAQLKEKDNKSSELPIVAKGDTDLVVESEDEDGFPISIAEKGVSVSKTEAEMKGEQARKKTEKANKKEKDVGHSASVKRKVDSADEDEPQDGKKKKKRNKLKDHIKGGSDHASDNSNEKKVTEPDEKHAEDVKTSTKLSDVSHAKDEDGGKLSNNEVLVEKKIKKKNKKKTKESEGEAAANQITTTAEKQNLSTEKKGKKQTETKPSQVRTFPNGLIIEEVFMGKPDGKKAAPGKKVSVKYIGKLQKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGINGMRIGDKRRITIPPSMGYADKRVGSIPPSSWLVFDVELVDVGR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02314 503 MobiDBLite consensus disorder prediction 358 372 - -
Gma01g02314 503 MobiDBLite consensus disorder prediction 158 195 - -
Gma01g02314 503 Gene3D Nucleoplasmin core domain 1 100 - -
Gma01g02314 503 PANTHER PEPTIDYLPROLYL ISOMERASE 1 254 - -
Gma01g02314 503 PANTHER PEPTIDYLPROLYL ISOMERASE 266 501 - -
Gma01g02314 503 MobiDBLite consensus disorder prediction 284 343 - -
Gma01g02314 503 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 254 - -
Gma01g02314 503 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 266 501 - -
Gma01g02314 503 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 415 502 IPR001179 GO:0003755
Gma01g02314 503 MobiDBLite consensus disorder prediction 105 137 - -
Gma01g02314 503 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 410 499 IPR001179 GO:0003755
Gma01g02314 503 MobiDBLite consensus disorder prediction 227 275 - -
Gma01g02314 503 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Gma01g02314 503 Gene3D - 356 502 IPR046357 GO:0003755
Gma01g02314 503 MobiDBLite consensus disorder prediction 105 389 - -
Gma01g02314 503 SUPERFAMILY FKBP-like 351 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02314 Gma-Chr1 58172083 58176787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02314 415 499 Calmodulin-binding Proteins AT5G48570 49.438 1.58e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02314 K14826 - gmx:100789099 934.095