Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02268 ATGTTTCAAGAAGAAGGGTTATCTTCTGTAACTTCTTCACCTCTTCAGTTCTTTTCCATGATGTCTCTTTCAGTTTCACCTAGCTTAGGATCTCCCTACCAAATGAAATGCGAGCAAAGGGGTTTGGTATTAATCCATTTGTTGCTCGCTGGTGCTAATTTTGTAGCCACCGGTGATTTACAAAATGCAAACCTCACACTTGAGCAGATTTCCCAGCATGCCTCTCTTGATGGGGATACTATGCAGCGAATTGCTTCTTATTTTTCTGAAGCACTCGCTGATCGGATACTTAAAACATGGCCTGGCATCCACAGGGCCCTCAATTCCAGCAGAATAACTATGGTTTCTGATGAAATTCTTGTTCAAAAGCTCTTCTTTGAGCTTTTACCCTTCCTCAAGTTCTCATATATCCTCACTAATCAGGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATATAGTTGATCTCTATGGGGCCGGACCGGCACAGTGGATTTCTCTCCTCCAAGTTTTGAGTGCACGTCCTGAAGGTCCTCCCCATTTGAGAATCACCGGGGTCCATCACAAGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTGAAGAGGCGGAAAAGTTGGATATCCCATTCCAATTCAACCCTGTGCTAAGCAAGTTGGAAAATCTTGATTTCGACAAACTTCGCGTTAAAACTGGGGAGGCACTGGCAATAAGTTCTATTCTGCAGTTGCACTCCCTTTTGGCCTTGGATGAAGATGCCTCGCGGAGAAAATCGCCTCTTTTGTCAAAAAACTCAAATGCAATTCACCTGCAGAAAGGCCTCCTCATGAACCATAACACACTGGGAGATTTGCTTGACGGCTATAGCCCGAGTCCTGATTCGGCCTCATCCTCACCAGCAGCGTCTTCATCTGCTTTGATGAATTCGGAGAGCTTTCTTAATGCCTTGTGGGGGTTATCCCCAAAAGTCATGGTTGTAACTGAACAAGACTTTAACCACAACTGTTTGACCATGATGGAGAGACTGGCAGAAGCTCTATTTTCTTATGCTGCATATTTTGATTGCTTGGAGTCCACGGTCTCAAGAGCATCCATGGACAGATTAAAACTTGAGAAGATGCTTTTTGGCGAGGAGATAAAGAACATCATAGCTTGTGAAGGATGTGAAAGAAAAGAAAGGCACGAAAAGATGGATAGGTGGATCCAGAGACTTGACTTATCTGGATTTGCAAACGTGCCTATAAGCTATTATGGGATGCTGCAGGGAAGGAGGTTCTTGCAGACCTATGGTTGTGAGGGGTACAAGATGAGGGAGGAATGTGGTCGGGTGATGATATGCTGGCAGGAGCGATCCTTGTTTTCCATAACAGCTTGGAGACCAAGGAAGTAA 1398 0.4471 MFQEEGLSSVTSSPLQFFSMMSLSVSPSLGSPYQMKCEQRGLVLIHLLLAGANFVATGDLQNANLTLEQISQHASLDGDTMQRIASYFSEALADRILKTWPGIHRALNSSRITMVSDEILVQKLFFELLPFLKFSYILTNQAIVEAMEGEKMVHIVDLYGAGPAQWISLLQVLSARPEGPPHLRITGVHHKKEVLDQMAHKLTEEAEKLDIPFQFNPVLSKLENLDFDKLRVKTGEALAISSILQLHSLLALDEDASRRKSPLLSKNSNAIHLQKGLLMNHNTLGDLLDGYSPSPDSASSSPAASSSALMNSESFLNALWGLSPKVMVVTEQDFNHNCLTMMERLAEALFSYAAYFDCLESTVSRASMDRLKLEKMLFGEEIKNIIACEGCERKERHEKMDRWIQRLDLSGFANVPISYYGMLQGRRFLQTYGCEGYKMREECGRVMICWQERSLFSITAWRPRK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02268 465 Pfam GRAS domain family 44 462 IPR005202 -
Gma01g02268 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 313 364 IPR005202 -
Gma01g02268 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 367 464 IPR005202 -
Gma01g02268 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 261 IPR005202 -
Gma01g02268 465 PANTHER BNAA06G02820D PROTEIN 367 464 IPR030008 GO:0003700|GO:0005634|GO:0009739
Gma01g02268 465 PANTHER BNAA06G02820D PROTEIN 1 261 IPR030008 GO:0003700|GO:0005634|GO:0009739
Gma01g02268 465 PANTHER BNAA06G02820D PROTEIN 313 364 IPR030008 GO:0003700|GO:0005634|GO:0009739
Gma01g02268 465 ProSiteProfiles GRAS family profile. 35 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02268 Gma-Chr1 57827014 57829252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02268 1 465 GRAS Transcription Factor Family AT1G50420 61.905 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma01g02268 GRAS 4.3e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02268 - - gmx:100775380 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02268 01 57827014 57829252 Gma11g00145 11 1145850 1148127 GST