Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02253 ATGTGCATGCCCATACGTGATCACACATGCAGCTTTTCAAACAGTAATAACGGACACAGTTGCCAGATGCATTCCAGCAACCCAAAGAAGAGAAAGCGTCCTTGCGACGACGACTGCTACACCAAGCCCGCCGCATCACACGGTTTCATATCCGTGATAGGGAGGCGACGCGCGATGGAGGACGCGGTCAAGGTAGTTCCAGGTTTGGTGGCGGCGGAACAACGCTGTGGCAGTTACGATTTCTTCGCTGTTTACGACGGGCACGGAGGGACCTTGGTGGCAAACGCTTGCCGCGACAGGCTGCACTTGTTGCTGGCGGAGGAAGTTAGGGAGAGCGCAGGAGGCAGAGGCTTGGATTGGTGCCAGGTCATGTGTTCGTGTTTCATGAAGATGGACAAGGAAATTGGAGTTGGTGAGGAGCAAGATGGCGGCGGCGGAAACACCATGGGTTCGACGGCGGCCGTGGTGGTGGTCGGAAAGGAGGAGATTGTGGTGGCCAATTGTGGTGACTCGAGGGCGGTGTTGTGCCGTGGCGGTGTAGCTGTGCCACTTTCACGTGACCATAAGCCTGATCGTCCAGACGAAAAAGAGAGGATAGAAGCGGCAGGTGGGAGAGTCATTAATTGGAACGGAAATCGTGTTTTGGGAGTACTTGCTACTTCCAGATCCATAGGGGATCACTGCATGAAGCCTTTTGTGATTTCAGAACCAGAGACGAAGGTGTACGCACGAACAGAGGCAGATGAGTTTGTGGTGGTGGCGAGTGACGGGCTGTGGGATGTAGTGTCTAACAAGTATGTTTGTGAGGTTGTACGAGGTTGCCTCCATGGGAAAATGAGGAGGAAATTAAAAGAGGAGCCCATTATAAGCTATGCAACAGAAGCTGCAGCGTTGTTGGCTGAGTTGGCTATGGCTCGTGGAAGCAAAGACAACATCAGTGTCATAGTCATCCCACTCAACACTACTACAACTTGA 975 0.5282 MCMPIRDHTCSFSNSNNGHSCQMHSSNPKKRKRPCDDDCYTKPAASHGFISVIGRRRAMEDAVKVVPGLVAAEQRCGSYDFFAVYDGHGGTLVANACRDRLHLLLAEEVRESAGGRGLDWCQVMCSCFMKMDKEIGVGEEQDGGGGNTMGSTAAVVVVGKEEIVVANCGDSRAVLCRGGVAVPLSRDHKPDRPDEKERIEAAGGRVINWNGNRVLGVLATSRSIGDHCMKPFVISEPETKVYARTEADEFVVVASDGLWDVVSNKYVCEVVRGCLHGKMRRKLKEEPIISYATEAAALLAELAMARGSKDNISVIVIPLNTTTT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02253 324 CDD PP2Cc 46 319 IPR001932 -
Gma01g02253 324 Gene3D - 41 323 IPR036457 -
Gma01g02253 324 PANTHER ALPHABET, ISOFORM E-RELATED 20 321 - -
Gma01g02253 324 Pfam Protein phosphatase 2C 47 312 IPR001932 -
Gma01g02253 324 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Gma01g02253 324 ProSiteProfiles PPM-type phosphatase domain profile. 46 319 IPR001932 -
Gma01g02253 324 SUPERFAMILY PP2C-like 43 320 IPR036457 -
Gma01g02253 324 SMART PP2C_4 36 317 IPR001932 -
Gma01g02253 324 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 20 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02253 Gma-Chr1 57711345 57712998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02253 24 319 PP2C-type Phosphatase Gene Family AT2G29380 47.727 6.16e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02253 K14497 - gmx:100785905 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02253 01 57711345 57712998 Gma01g02253 01 57711345 57712998 ECH
Gma01g02253 01 57711345 57712998 Gma11g00163 11 1260159 1261880 GST