Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02251 ATGCATGGCTGTGTCGCCAACAGTGGTGGTGAAATCACTGGCTATTTCGCCAGTGGTAATGACTACACCCATGCCATGTCATCTTCAACCCATGAGTCAAACCAACGATTTCATCATCCGCCACGCGTCTCCACCTCCGCTATCTCGTCGTGCATGCTGGTAAATAATTGGTCAAATGTAGAATCTACCACGGAGACAACTAGTCGCCAGATTATCTTGAACTCCTCTGATCAGCAGTCTCTGCACCCCTCCCTCCTTGTTTGTATCATATCAGGCAGCTCAGAAGGCAAAGATAGATCCATGTCCACCACCGCAACTACAACCTCTGAAGTTAGCAGCAATGAGTGGAAAGTCATACACATGAGCGAGCAAGAGGAGGATCTCATTCGCAGGATGTACAAGCTAGTCGGGGACAAGTGGAATTTGATAGCTGGTCGCATTCCCGGTCGTAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGGCGATGCTTTTTCTGTTAAAAGAAACGGAAGTAAAACCCAAGACTCGTGA 540 0.4741 MHGCVANSGGEITGYFASGNDYTHAMSSSTHESNQRFHHPPRVSTSAISSCMLVNNWSNVESTTETTSRQIILNSSDQQSLHPSLLVCIISGSSEGKDRSMSTTATTTSEVSSNEWKVIHMSEQEEDLIRRMYKLVGDKWNLIAGRIPGRKAEEIERFWIMRHGDAFSVKRNGSKTQDS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02251 179 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 101 172 - -
Gma01g02251 179 Pfam Myb-like DNA-binding domain 122 160 IPR001005 -
Gma01g02251 179 Gene3D - 122 162 - -
Gma01g02251 179 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 101 172 - -
Gma01g02251 179 SMART sant 117 165 IPR001005 -
Gma01g02251 179 SUPERFAMILY Homeodomain-like 122 160 IPR009057 -
Gma01g02251 179 CDD SANT 121 159 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02251 Gma-Chr1 57680148 57685431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02251 121 159 MYB Transcription Factor Family AT5G52600 58.974 2.30e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma01g02251 Myb_DNA-binding 5.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02251 K09422 - gmx:100814431 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02251 01 57680148 57685431 Gma11g00165 11 1286473 1289409 GST