Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02234 ATGCACTCTCACTCACACCCACATGCCTTGCCACGCCCACATTCACTACTCCCTTCTTCTTTTCTTCTTCTTCTTCCTCCTTCCTCTCTCCGCATCTCCAATACTAAGAGGCTGCAGTCCTCAACTTTCGCCCTCTCCCAAAATGAAACCAAATTCCCAACGCAGCCTTACAAGAATTCCAACAATTCGTCTCAATCACTTGCTCACATCTCCAATTGCAAATTCCCCTTGGCTCGGCCCCTTGTTTCTTCTTCTCATCCCGCTAGTACTAATTCATCCACCAAGCTTCTCAACTCTATGCTGCTCTTCGCCTTCCTCACACTTCAACCCTCTTATCCTGCACTTGCTGCTTCTTCTGACTTCTCCACTATATTTGGGGATATTGGTGACTTAAGCACAGGTTTTGCTTCAGCGTTTCTGCTAATATTTTTCTCTGAACTGGGAGACAAGACCTTTTTCATTGCAGCGCTACTAGCAGCTAGGAACTCAGCTGGTGTTGTTTTTATTGGAACATTTGGCGCACTTGCGGCAATGACTCTGATATCTGTTGTCCTTGGACGAACCTTTCATTATGTTGATGAAATCTTGCCATTCAGGTTTGGAGAAACTGATTTACCCATTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCCTGCTGGATGCCTCATCTAGCGATGGCCAAAAATCAGATGAAGAGCAGAAGGAGGCAGAACTAGCAGTTTCTGAATTTTCTGGAAATGGTGCTGGGATACTATCTGCTGCTAGCACAGTTGCCAGTACTTTTCTCTTAGTTTTTGTTGCTGAATGGGGCGACAAGTCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCTCCCCTTGGAGTCATAGCTGGAGCACTGGCTGGTCATGGTGTTGCAACTTTGCTAGCTGTACTTGGGGGTTCTTTACTTGGGACGTATTTGTCAGAGAAGGTTATTGCCTACATCGGAGTCAAAACCCTAGAATCGTTCCCCAAGCTCTGCGGAAACTACATAACTAAATCACTTCAAATTGAGGAATTACTATTAATTACCGCGAGCTCTACGCTTAGTAGGTTATTTATGTTGAGCGAAGGATTCCGAATTTCAAAAAGTTCTAGTGCTAACCATGTGAACTTGAGTTTCACAGCTAACTGTTCTGCAAATGCATTCAAGATTTTGGGTAACTCAATGCAAGTTGAAGTAAGGGGAGCTGATTGTAGTACAAATAATATCTTACAACTTGATTCCCATGGTTCTTCAATTTCAAAGGGAATGAAAAGAAAGTGGGATTTAATTGATGGATGTATGGGTCTGAGCATTGGCTCTTCTTTGTCTCTTGGACTTTCAACAAGTTCCTCGGACAGCAAGGAGAGTTCAGCTACTGCTTGCACTGCTTTGTCTTCAGCCAAAGAGATTGATGAGGAATCGTCCATGCCTATGGATATTGAACTGGACTTTACACTTCATCTTGGCTGCGAGAAGGTAAAGAGCCCAAAAAAACTTGCTAGTTCAAATTTGAAGATATTTGAGTTGCAGCCTAAGGTTGATTTGGAGTTGAGCCTTTCCACACGGCCCTCTGAATCAGATATTACTAGTGTTTGTCTAAGTCCTTCTCAGGCCCCATCTTTCCGATTGAACATGGAGACACCATTAGTATTCAGCAGGACACCAAATGCAGATGAGGGATCAACTTCATGTAGATGGAAACCAGGGCTTGTTTCACTTAATGCAAGTGCTAGTGTAATGTTAAACCAGGCTGAAAAGAAGTTTGATCATAATCCCATTGTTCTAGATCTCTCATCAACGAGACCAGAAAGTTCAGTCACTAGTACTTCCAGACTAACACAACAGAAACAACCACTATATTGCAATAGCAATTCTAAGACATGTCAAGTTGAGGGATGTGGAAAGGGAGCCAGAGGTGCTTCTGGACGTTGTATATCTCATGGTGGTGGTAGGAGGTGTCAGAAACCTGGCTGCAATAAAGGAGCTGAAGGCCGTACTGTATACTGCAAGTCTCATGGAGAAGGCAGGGGATGCGAATATCTTAGTTGCACTAACAGTGTAGAAGGACATACAAATTTCTGTATTGCTCATGGTGGTGACCAGAGATGTAGTCATGAGGGTTGTTTCCGAGCTGCCAGAGGGAAATCTGGATCGTGTATTCGGCATGGTGGTGGCAAGAGATGTGAAATAGAAAATTGTACTAAGAACTCAGAAGGCTTACCAGGTCTGTGTATCTCACGTGGTGGAGGGTGTAGATGTCAAGCTTCTGGTTGTACAGAAGGGGCACAGGGAAGCACTATGTTCTGCAAAGCACATGGTGGGGGAAAACGCTGTACAGCACCAGGGTGCACCAAAGGTGCTGAGGGGACCACACCACTTTGCAAAGGCCATGGTGGAGGAAAATGCTGTGCAGACCACGGTGGTGGAATTTGTACTAAAAGTGTGCATGGAGGTACCAACTTCTGTGTGGCACATGGGGGTGGAATGAGGTGTTCTGTACCTGACTGCATGAAGAGTGCCAGGCAACAAAGCGATTATTGTATATGTCATGGAGGAGGCAAGAGATGCAAGTTTGAAGGGTGTGGAAAGAGTGCACCAGGTGGCACTGACTTTTGCAATGCACATGGGGGAAGGAAGAGATGCTCTTGGGGCCATCCTGGGTCAGAATATATCAATCAACAGGGTGGCTCTTGTAGTTCATTTGCAAGGGGGAAGACAGGTCTGTGTGCACTTCATAGTGGGCTAGTGCTGGATAAGAGAGTTCATGGAGGTGTAACCTTGGGACCAGTTATTCAGGATAGTCATGTTAGTAAACTGGATGAACCGAAGCAGATAGTCATTAACCAAGATATTGACGTAGATATGATGAAAATGGGTAGCCCACGGGCAGCTGGTGTGATAACTTGTTCTGATGTTAAACTAAATGAAGTTGCAAGTACTCGTCTCCCATCTGGGGAAGATGGTCACACACCAATGTCAGTAGCAGTTCCTGAAGGCAGGGTGCATGGTGGAAGTCTGATGGCACCGCTGATGGGGAGTTCTGGCCTTGGTACAAGCAGTGGGAGAGATCTATTGAGTGATCAATCTGAGACAATTGAAGCTGGCATCCTGCCCCAGTAA 3147 0.4525 MHSHSHPHALPRPHSLLPSSFLLLLPPSSLRISNTKRLQSSTFALSQNETKFPTQPYKNSNNSSQSLAHISNCKFPLARPLVSSSHPASTNSSTKLLNSMLLFAFLTLQPSYPALAASSDFSTIFGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDEEQKEAELAVSEFSGNGAGILSAASTVASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLSEKVIAYIGVKTLESFPKLCGNYITKSLQIEELLLITASSTLSRLFMLSEGFRISKSSSANHVNLSFTANCSANAFKILGNSMQVEVRGADCSTNNILQLDSHGSSISKGMKRKWDLIDGCMGLSIGSSLSLGLSTSSSDSKESSATACTALSSAKEIDEESSMPMDIELDFTLHLGCEKVKSPKKLASSNLKIFELQPKVDLELSLSTRPSESDITSVCLSPSQAPSFRLNMETPLVFSRTPNADEGSTSCRWKPGLVSLNASASVMLNQAEKKFDHNPIVLDLSSTRPESSVTSTSRLTQQKQPLYCNSNSKTCQVEGCGKGARGASGRCISHGGGRRCQKPGCNKGAEGRTVYCKSHGEGRGCEYLSCTNSVEGHTNFCIAHGGDQRCSHEGCFRAARGKSGSCIRHGGGKRCEIENCTKNSEGLPGLCISRGGGCRCQASGCTEGAQGSTMFCKAHGGGKRCTAPGCTKGAEGTTPLCKGHGGGKCCADHGGGICTKSVHGGTNFCVAHGGGMRCSVPDCMKSARQQSDYCICHGGGKRCKFEGCGKSAPGGTDFCNAHGGRKRCSWGHPGSEYINQQGGSCSSFARGKTGLCALHSGLVLDKRVHGGVTLGPVIQDSHVSKLDEPKQIVINQDIDVDMMKMGSPRAAGVITCSDVKLNEVASTRLPSGEDGHTPMSVAVPEGRVHGGSLMAPLMGSSGLGTSSGRDLLSDQSETIEAGILPQ 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02234 1048 Pfam Uncharacterized protein family UPF0016 265 331 IPR001727 -
Gma01g02234 1048 Pfam Uncharacterized protein family UPF0016 137 220 IPR001727 -
Gma01g02234 1048 PANTHER F22C12.10 384 1031 - -
Gma01g02234 1048 MobiDBLite consensus disorder prediction 1026 1048 - -
Gma01g02234 1048 ProSitePatterns Uncharacterized protein family UPF0016 signature. 146 155 IPR001727 -
Gma01g02234 1048 PANTHER EMB|CAB89363.1 384 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02234 Gma-Chr1 57544120 57554244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02234 762 923 WRKY Transcription Factor Family AT4G12020 50.000 1.94e-43 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02234 - - gmx:100809074 1330.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02234 01 57544120 57554244 Gma01g02234 01 57544120 57554244 ECH
Gma01g02234 01 57544120 57554244 Gma11g00181 11 1414860 1418793 GST