Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02223 ATGGATTGGGATTTGCAAGCTATTGTGGGATGCAACAAAGCCCCTGCAGCCACCGTGATGGACAACCCGCATCTCATTTTTTCTCAACATTTCTGTCCTGAAGAACAAGATGACCTACTTTGCAATTTTCAGGAATTCTCAGAAACCACAACGGTGGTTGATGAATTAGAAGAGCTTTACAAACCTTCCTACCCTCGTCATGTTCATGACAACCCTCTTCCCGTCGTTGCAAATTCCCCACCTATCCTAGATGAAAAAGTCAAAGAACTCAAACCATCAGACAAAACAGCATCTAGATGTAAAAAAAGCAAGAAGCGGCAGAAGAATAAGAGGGTGGTGACAGCTGCAGATGGTGTTTCGGACCCATGGGCATGGCGTAAATATGGGCAGAAACCAATAAAGGGGTCACCTTATCCTCGTAGCTATTATAGATGTAGCAGCTCCAAAGGGTGCTTAGCTAGGAAACACGTGGAACGGAGTCATTTGGATCCTGGAGTTTTCATAGTTACCTACACTGCAGAACACAGCGATCCTCACCCTACATGCAAAAACTCACAACAAAGAAAGAACAGTTCCACAATTCCACTTCCAACTACAAGAACTCGGGATGATCAACACACATTAATACCTGTGGTGGCGGAGGCTATCGAAGATGAGCATGAAGAAATTAAGGAGCTTAAGAAAGAGGAAGATTTTGTAGAAGGTGTTGGTTTCCAAGCATCGAAGTTGAGGAACTAA 738 0.439 MDWDLQAIVGCNKAPAATVMDNPHLIFSQHFCPEEQDDLLCNFQEFSETTTVVDELEELYKPSYPRHVHDNPLPVVANSPPILDEKVKELKPSDKTASRCKKSKKRQKNKRVVTAADGVSDPWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKHVERSHLDPGVFIVTYTAEHSDPHPTCKNSQQRKNSSTIPLPTTRTRDDQHTLIPVVAEAIEDEHEEIKELKKEEDFVEGVGFQASKLRN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02223 245 Gene3D WRKY domain 92 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma01g02223 245 Coils Coil 216 236 - -
Gma01g02223 245 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 2 235 - -
Gma01g02223 245 MobiDBLite consensus disorder prediction 92 113 - -
Gma01g02223 245 MobiDBLite consensus disorder prediction 177 205 - -
Gma01g02223 245 Pfam WRKY DNA -binding domain 121 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma01g02223 245 ProSiteProfiles WRKY domain profile. 114 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma01g02223 245 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 235 IPR044810 GO:0003700
Gma01g02223 245 SMART WRKY_cls 119 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma01g02223 245 SUPERFAMILY WRKY DNA-binding domain 115 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02223 Gma-Chr1 57442275 57443111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02223 2 233 WRKY Transcription Factor Family AT4G01250 38.976 1.38e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma01g02223 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02223 K13426 - gmx:102667019 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02223 01 57442275 57443111 Gma01g02223 01 57442275 57443111 ECH
Gma01g02223 01 57442275 57443111 Gma10g02188 10 49465910 49467025 ECH
Gma01g02223 01 57442275 57443111 Gma18g02196 18 55762651 55764722 ECH
Gma01g02223 01 57442275 57443111 Gma16g00288 16 3041246 3043246 ECH
Gma01g02223 01 57442275 57443111 Gma11g00193 11 1517954 1518722 GST
Gma01g02223 01 57442275 57443111 Gma05g02071 05 41968198 41969676 PCT
Gma01g02223 01 57442275 57443111 Gma08g00174 08 1506030 1507788 PCT