Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02221 ATGATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCGAAGCACCCGGAGATTGATGTGCCGAATCTGCAGGTGATAAAGCTGATGCAGAGCTTCAAATCCAGAGAGTACGTGAGGGAAACATTTGCGTGGATGCACTATTACTGGTTCCTCACCAACGATGGAATTGAGTTCCTTAGGACTTACCTCAACCTTCCATCCGAAATTGTCCCTGCCACTCTCAAGAAGCAGGCCAAGCCCGCCGGAAGACCATTCGGTGGCCCACCCGGTGATCGCCCCAGGGGCCCACCTCGCTTTGACGGAGAGAGGAGATTCGGCGGTGACCGTGATGGATACCGTGGAGGTCCACGCGGACCTGGCGGTGATTTCGGTGACAAGGGTGGAGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTGGTCCTGGCGGAAGGCCTGGCTTCGGTCGTGGTTCCGGTGGTTATGGGGCACCGACTAGTTCAAACATTCCTTCTTAA 546 0.544 MIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGGPGGRPGFGRGSGGYGAPTSSNIPS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02221 181 Gene3D - 1 104 IPR036388 -
Gma01g02221 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Gma01g02221 181 MobiDBLite consensus disorder prediction 91 181 - -
Gma01g02221 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 179 IPR037447 -
Gma01g02221 181 MobiDBLite consensus disorder prediction 112 128 - -
Gma01g02221 181 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02221 Gma-Chr1 57424406 57426797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02221 1 154 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.468 2.65e-77 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02221 K02947 K09422 gmx:100803556 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02221 01 57424406 57426797 Gma01g02221 01 57424406 57426797 ECH
Gma01g02221 01 57424406 57426797 Gma11g00198 11 1552808 1554719 GST
Gma01g02221 01 57424406 57426797 Gma05g02065 05 41892883 41896957 PCT