Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02220 ATGGGTAGCAAAGGCAAACGCAAAGAGCAAGAATCAATAATAACGAGGGTTATGGCTCACGGAGGTAGATACGTGCAATACAACGTGTACGGAAACTTGTTCGAGGTCTCCTCCAAGTATGTCCCTCCCATTCGCCCTGTCGGTAGAGGCGCATACGGCATCGTTTGTGCTGCTGTTAATTGCGATACGCACGAGGAAGTTGCCATAAAGAAGATTGGTAACGCCTTTGACAACATCATTGACGCTAAACGAACTTTGAGGGAAATCAAGCTCCTTCGCCACATGGACCATGAAAATATAATTGCCATTAGGGATATCATACGACCTCCCAGAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATTATTCGTTCTGACCAACCTCTTAACGATGACCACTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATATCTTGCACCGTGATCTTAAGCCCAGTAATTTGCTTCTCAATTCAAACTGTGACCTTAAAATTGCGGACTTTGGTCTGGCAAGGACAACATCTGAAACGGATTTCATGACGGAGTATGTTGTCACACGATGGTACCGAGCCCCAGAATTGCTTCTTAATTGTTCAGAGTACACCTCCGCGATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGAAAAGATTATGTTCATCAACTGAGGCTTATAACAGAGTTATTAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGGAAATGCCAAAAGATATGTTCGACAGCTTCCACAATATAGGAAGCAAAATTTCTCCGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATCTACTAGAAAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCATCCATATCTTTCATCACTTCATGACATCAATGATGAACCGGTTGGTCCTGGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCGGTGAAGTACAATCCAGATCCACCCAGTCAGTAA 1128 0.4291 MGSKGKRKEQESIITRVMAHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGAYGIVCAAVNCDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIRDIIRPPRKDAFNDVYIVYELMDTDLHQIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANILHRDLKPSNLLLNSNCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSGNAKRYVRQLPQYRKQNFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWRESVKYNPDPPSQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02220 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 374 - -
Gma01g02220 375 SUPERFAMILY Protein kinase-like (PK-like) 44 335 IPR011009 -
Gma01g02220 375 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
Gma01g02220 375 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02220 375 CDD STKc_TEY_MAPK 34 370 - -
Gma01g02220 375 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02220 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 374 - -
Gma01g02220 375 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma01g02220 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Gma01g02220 375 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02220 375 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Gma01g02220 375 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02220 Gma-Chr1 57419103 57422444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02220 1 370 MAP Kinase Gene Family AT4G01370 81.081 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma01g02220 Pkinase 5.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02220 - - gmx:100803024 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02220 01 57419103 57422444 Gma01g02220 01 57419103 57422444 ECH
Gma01g02220 01 57419103 57422444 Gma11g00199 11 1557681 1560675 GST
Gma01g02220 01 57419103 57422444 Gma05g02064 05 41888423 41892137 PCT
Gma01g02220 01 57419103 57422444 Gma08g00167 08 1436892 1439789 PCT