Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02215 ATGGCTCGACAACCTTGTGATGACAAATCATCATCTGGATTCTGCTACTCTGATGTGTCATCGGGAAATCCAACGATGTTGGTGAATCAGATCCAAGGCTTTGTGTCAGACCCGGAGATGTACAACCTAACCACAGGCATGGAAATGATAGGGTTTCCAAAGAGTGACACCAACGCTGTCATGTGGAGAAGTTTCATCCCCAAACCGGGTCCTTCCTCTTCCAAAACCATCAACGATAATTCCACAACTTTCTACCACCACGACTACAACAACAAGCATGCAGATTTCACACCAGCTGGGAATATTTCTCAAACAAGTGCCGATAATCTAATCGTGGGAAGTCATGATTCAGCCTCGTGGCAAGACAACATCAACAACAACAATAACAGCAGCAGGTTTGATGATTCTTCTCTAAGGTGTGTGTTTCCTTGTGAAACCAACGAAAGGCCTAGCCAAGGTCTTTCACTCTCTCTTAGTTCAACCAACCCTTCCTCTATCGGGTTGCAATCTTTTGAGCTAAGACAAACAGGCCAACATCTTGATTTTGTTTCGTCGAGTTCCAGAGATGGGTTCTTTGGAAAACCAGTTTCTCTTCAACAGCAACAGATGGTATCACAAGATGGGTATGTGAGTTCTAATTCTAAAGTTGCAAGCGTTTATCAACAAGGACATTTCCTGGTGAAGAACTCCAAGTTCTTGGTGCCTGCACAAGACCTTCTCAACGAGTTTTGTAGCCTTGACGCAAAGCAAAGCGACTTGGGAAAGCCAACAAAATCGTTGAATAAGAAGCAGTGGGAAGAGGAAAATAACGGTATCGGTTCCTCGAAGAAGCATTCTCTGACCTCTCTAGAGTTCGTGGAGTTGCAGAAGAGAAAGACAAAGCTGCTTTCGATGCTGGAAGAGGTTGACAGAAGGTACAAGCACTACCGCAATCAGATGAAGAGCGTGGTGTCGTCGTTCGAAGCGGTGGCGGGGAATGGTGCTGCCACGGTGTACTCAGCTTTGGCGTTGAAAGCCATGTCGAGACATTTCAGGTGTTTGAAGGATGGGATTATGGCGCAGATTCAAGCAACAAGAAAAGCCATGGGAGAGAAAGACCCAGTTGCACCAGGCACAACAAGGGGCGAAACGCCAAGGCTCAAAGTTATTGACCAAACACTGAGGCAACAAAGGGCGTTTCAGCAAATGAGCATGATGGAAACCCATCCTTGGAGACCCCAACGTGGCCTTCCTGAGCGAGCTGTTTCAGTTCTTCGGGCTTGGCTCTTTGAGCATTTTCTCCATCCGTACCCAAGCGATGTTGATAAACATATTTTAGCACGCCAAACCGGTCTCtcgagaggacagGTTTCGAATTGGTTTATTAATGCAAGGGTGAGACTATGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAAGTGAAGGACCCTGAAAACAACATAGCTTCCTCAGAAGGGGCTACTGATCAAGACAATGATATAAACCCAAATAATGTTGAATACCCTCCACCTCCTTCTTCATCACGATCAGAGGATCAGAAGCCATCTCTGGTTCGAATTGACTCCGAGTGTGCATCCTCCATCATCAACAACCACAGTACCCCAGATAACAAAAACGACCCAAAGGGCCACGAACAGTGCTTTGGGTCAGTGGAGCTTGATTTTTCATCATACACACACCACTCCTCGGGTATAGTTTCTTACGGAAGTAATGATCAGAATGGGAACAACAACCAGAGTGGGGTGTCTTTGACGCTAGGGTTACAGCAACATGGGGTGAGCCTAGCGTTCCCGCCAGCAACACAGAGTTCACTGTACTATCCAAGGGACCAAATTGAAGATTGTCAACCAGTTCAGTACTCTCTTTTCGATGGTGAAGGACAAAACCTGCCTTACAGGAATTTGATGGGAGCACAGCTTCTACATGACTTGGCAGGGTAG 1941 0.4611 MARQPCDDKSSSGFCYSDVSSGNPTMLVNQIQGFVSDPEMYNLTTGMEMIGFPKSDTNAVMWRSFIPKPGPSSSKTINDNSTTFYHHDYNNKHADFTPAGNISQTSADNLIVGSHDSASWQDNINNNNNSSRFDDSSLRCVFPCETNERPSQGLSLSLSSTNPSSIGLQSFELRQTGQHLDFVSSSSRDGFFGKPVSLQQQQMVSQDGYVSSNSKVASVYQQGHFLVKNSKFLVPAQDLLNEFCSLDAKQSDLGKPTKSLNKKQWEEENNGIGSSKKHSLTSLEFVELQKRKTKLLSMLEEVDRRYKHYRNQMKSVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGIMAQIQATRKAMGEKDPVAPGTTRGETPRLKVIDQTLRQQRAFQQMSMMETHPWRPQRGLPERAVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRGQVSNWFINARVRLWKPMVEEMYLEEVKDPENNIASSEGATDQDNDINPNNVEYPPPPSSSRSEDQKPSLVRIDSECASSIINNHSTPDNKNDPKGHEQCFGSVELDFSSYTHHSSGIVSYGSNDQNGNNNQSGVSLTLGLQQHGVSLAFPPATQSSLYYPRDQIEDCQPVQYSLFDGEGQNLPYRNLMGAQLLHDLAG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02215 646 Gene3D - 407 469 - -
Gma01g02215 646 SMART prehox3 221 353 IPR006563 -
Gma01g02215 646 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 9 605 - -
Gma01g02215 646 ProSiteProfiles 'Homeobox' domain profile. 401 464 IPR001356 GO:0003677
Gma01g02215 646 MobiDBLite consensus disorder prediction 480 517 - -
Gma01g02215 646 Pfam Associated with HOX 227 351 IPR006563 -
Gma01g02215 646 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 9 605 - -
Gma01g02215 646 SUPERFAMILY Homeodomain-like 405 471 IPR009057 -
Gma01g02215 646 SMART HOX_1 404 468 IPR001356 GO:0003677
Gma01g02215 646 Pfam Homeobox KN domain 421 460 IPR008422 GO:0003677|GO:0006355
Gma01g02215 646 MobiDBLite consensus disorder prediction 481 497 - -
Gma01g02215 646 CDD homeodomain 404 465 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02215 Gma-Chr1 57376929 57380785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02215 86 645 Homeobox Transcription Factor Family AT5G41410 45.955 7.32e-142 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma01g02215 POX 9.4e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02215 - - gmx:100800542 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02215 01 57376929 57380785 Gma01g02215 01 57376929 57380785 ECH
Gma01g02215 01 57376929 57380785 Gma11g00202 11 1592377 1595541 GST
Gma01g02215 01 57376929 57380785 Gma05g02059 05 41842261 41844156 PCT
Gma01g02215 01 57376929 57380785 Gma08g00162 08 1391922 1395798 PCT
Gma05g00377 05 3520741 3524653 Gma01g02215 01 57376929 57380785 PCT