Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02211 ATGTCTTCTGATCACTATACTTTTGACGTTTCTTACCAAAGACATGCAAGCCCAGACAACATGATCTCCTATGATGGAAATGGAAATCTTGTGTTTTTCACTGACCCTCAAGGGAATTTTAACAGTTCTCTTGACCCTTTTCCCCCTTCTTTCTGCTCTTTTTCTTCTCAGGAAAACCCTGTGCAGCCTCTGTCTAATATAAAGGGTGAGTTTAGAAGCTTCTCTTCTTTGTATGGCTCCGAAGTGACGAGTGAGGAATGCCAAATGGGTGTGGATTATACCTATAATCAGCAATTTCTTTCTCAATCTCAAACTTGTCATGGTTCTGAAAGTGCATCAAAGTTAATACATAGGAGCTTCAGCTGTACCTCTTTTGATGGGAAGCCTGGTTTCCCCTTTGAACCTCACCCTGACACTCTCATGGACTTTCAATGCCATGCTTTGAACTCCCCTGAAAACACTTTCTTCGCAGCACAAATGAGGAGAGTGTGCAGTACAGGAGACTTGCAGAACATGAAATCAACAGATATGTCTCAAAAAGGGAGCCCCTTGTTGGAGGAAGCAAACTTCAAAGTAGGGCGTTATAGTGCTGAAGAAAGAAAAGAAAAAATCTCTAAGTACAGAGCCAAGAGAAGCCAGAGGAAGTTCAACAAGATAATTAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAACCCGCATACGTGGCAGATTCGCACGCAACGACGAAATCAGCGAGATTCCGAAAGCTCCTTGCTCAAGTTCAACCACAGAAGAATATGAAGACGAGTTCTGGGTTGAATTCATTGAAGGATTAAATGAGGAGGTCATGGCTTAA 840 0.4262 MSSDHYTFDVSYQRHASPDNMISYDGNGNLVFFTDPQGNFNSSLDPFPPSFCSFSSQENPVQPLSNIKGEFRSFSSLYGSEVTSEECQMGVDYTYNQQFLSQSQTCHGSESASKLIHRSFSCTSFDGKPGFPFEPHPDTLMDFQCHALNSPENTFFAAQMRRVCSTGDLQNMKSTDMSQKGSPLLEEANFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDEISEIPKAPCSSSTTEEYEDEFWVEFIEGLNEEVMA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02211 279 Pfam CCT motif 200 242 IPR010402 GO:0005515
Gma01g02211 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 40 276 IPR045281 GO:0009909
Gma01g02211 279 PANTHER CCT MOTIF FAMILY PROTEIN 40 276 - -
Gma01g02211 279 ProSiteProfiles CCT domain profile. 200 242 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02211 Gma-Chr1 57336839 57338351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02211 196 247 C2C2-CO-like Transcription Factor Family AT5G24930 46.154 2.98e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma01g02211 CCT 1.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02211 - - gmx:100798428 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02211 01 57336839 57338351 Gma01g02211 01 57336839 57338351 ECH
Gma01g02211 01 57336839 57338351 Gma11g00207 11 1636692 1638695 GST
Gma01g02211 01 57336839 57338351 Gma05g02055 05 41799779 41801637 PCT
Gma01g02211 01 57336839 57338351 Gma08g00158 08 1343321 1345327 PCT