Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02207 ATGTCATCATGGTGGAAAAAGTCTTCATCCAAAGATGTAAAAAGGAAAGAAAAAAGGAAAAGTATTATTGATACAATACAAAGGAAATTAAATAGATCAAGAGGGTCTAGGAGACATCATAGTCACACTATCTCAGAGAAGGGAACCACATTCCTTGTGCCTACAACATCACCATCACCCTCAACACATGTCTCCCGCCTACAAAGTTTTGCAGAAAGACCTCTTGCTCAGCCACTCCCACTCCCAGGGACGCATCGCCTCTCCACCAATCGTGCAAATTCTGGAACTAGTGTAACATCAAAACCAGAAAGCACCAGGGGCTCAAAATCATCTCTATATTTCCCCTTACCGAAACCTGGTTGTGTTTTTAACGGGGGAGAACCTACAGATGCTGAGGAAGATATTGGCACTGCATCAATTTCTAGCGGCAGCTCTATTGATAGTGATGACCAATGTGACTCACATTTTCTTAGTCCTCTGGCATCTGACTCTGAAAATGGAAACCGAGCTACCGTTCACAGTACTGTCAGTGGGGTTCACAAGGATCAGCCGCCCATTACCATCCCAAAAAACTCAAGGGTATCCTCAAAACCAGCTCCTCAACTGTGCAATCATCAAATTTTATCTAACACACCCAAAGGGGCTTCTTTGCATATGCCGAATCCACAAATAGCTTGTTCAGGTGGTTTATGGAGTGCTCCAGACAGTTCAATGTCAAGTCCTTCTAGAAGTCCACTGAGAACGTTTGGTTCCGAGCAAGTTTTGAACTCTGGATTCTGTACAGGAAAGCCATATCCAGATTTAGCTTCTGGACACTGCTCTAGTCCAGGTTCAGGCCATAATTCAGTTGGTGGGGATCTGACAGTGCAGATATTCTGCCCACAGAACAGGTGTAGCCCTGAGTGTTCTCCAATACCCAGTCCCGGAATGAAAAGTCCCGGTTTCAGTTCCAGGATACACAGCAGTGCTGTCTCCCCTCTTCATCCATGTGCTGGAAGTGCTACATTAGAATCGCCCACAAGACGCCCTGATGATGTGAAACAACAGACTCACCGATTACCTCTTCCTCCAATAACAATCCCTAATTATTGTCCATTTTCTCCAACATATTCTGCAACTACTACTCCTTCAGCACCTCGTAGTCCCAGCATAGCAGAAAATCTAACAAGCCCTGGCTCACGCTGGAAAAAGGGACAACTGCTTGGAAGGGGGACATTTGGGCATGTATATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTTTTTTCAGATGATGCTAAATCAAGGGAAAGTGCTCAACAACTTGGCCAAGAAATTGCATTGCTAAGTCATCTGCGGCATCCAAATATAGTCCAATATTATGGATCTGAGACGGTAGATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAGTTGCTTCAACAGTATGGCCAGCTTAGTGAAATTGTTATTCGTAATTATACTCGGCAAATTCTGTTAGGTCTTGCTTATTTACATGCTAAGAACACTGTTCATAGAGACATTAAAGCAGCAAACATATTGGTGGATCCTAATGGGAGGGTAAAATTGGCAGATTTTGGCATGGCAAAGCATATAAGTGGGCAATCCTGTCCATTATCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTGATAAAAAATTCAAATGGTTGTAATCTTGCTGTTGATATATGGAGCCTTGGCTCTACCGTTTTTGAGATGGCTACTACAAAACCTCCTTGGAGCCAATACGAAGGGGTTGCGGCTATGTTTAAGATTGGAAACAGCAAGGACCTTCCTGCAATGCCAGATCATCTATCAGAAGATGGAAAAGATTTTATCAGGCAATGCTTGCAAAGGAATCCAGTGCATCGTCCCTCTGCTGCTCAACTTCTGCTGCATCCATTTGTTAAAAAAGCCACACTGGGAAGACCTATTCTGTCTGCTGATCCTTCAGAAGCAAAACCTGATTTTGTGAATGCTATGAGATCTCTGGCCATTGGACCTGCAAAACATAATTTAGCCTTAGTTTCAGAAGCAGCTGGTACATATCTGTCTAGAAGCTCGAGAACTGGCTCAGGATCAAGTGAAGCCCATACACCAAGGAACATTTCATGTCCTGTGTCCCCTCCTGCTGGGAGCCCACTTTTGCCTCCTAGGTTACTGCATGTGACTGGACGGCTGTCTCCATCTCCCATATCTAGTCCTCACACTGCATCAGGCTCATCTACACCACTCACTGGTGGCATTGGTGCAGTCCCTTTTCATCTAACAAAGCAGCCAATATTCTCACATGAAGGTATCAATGTGATACAAAGACCTCAAAATGCTCTTAATTCAAATGGAAGCACTGCTTATCAGGAGCCAAATTGTGACCCACTTTGGAGGATTCTGAAAAGCACTTTTGCTTGCCCGGATATAGTTTCATCCAACAATGATGCTCTTGGAAACCATAATAGGAGGGTTGGCCAGGGACTCCCAAGAGAATTTTACGATGGGAAGTCATATTTAGCGGATGGTGTATCGCAGCAGCTGTTAAATGATCATATGGCAGATGACTTGCAGAGTTGTCAGAATTGCAGCTTTTCATTTGACCCCACCCTCACTCAGGTCCGTCGTACAAAGTGGCCCATTTGA 2679 0.4408 MSSWWKKSSSKDVKRKEKRKSIIDTIQRKLNRSRGSRRHHSHTISEKGTTFLVPTTSPSPSTHVSRLQSFAERPLAQPLPLPGTHRLSTNRANSGTSVTSKPESTRGSKSSLYFPLPKPGCVFNGGEPTDAEEDIGTASISSGSSIDSDDQCDSHFLSPLASDSENGNRATVHSTVSGVHKDQPPITIPKNSRVSSKPAPQLCNHQILSNTPKGASLHMPNPQIACSGGLWSAPDSSMSSPSRSPLRTFGSEQVLNSGFCTGKPYPDLASGHCSSPGSGHNSVGGDLTVQIFCPQNRCSPECSPIPSPGMKSPGFSSRIHSSAVSPLHPCAGSATLESPTRRPDDVKQQTHRLPLPPITIPNYCPFSPTYSATTTPSAPRSPSIAENLTSPGSRWKKGQLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSRESAQQLGQEIALLSHLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQQYGQLSEIVIRNYTRQILLGLAYLHAKNTVHRDIKAANILVDPNGRVKLADFGMAKHISGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGSTVFEMATTKPPWSQYEGVAAMFKIGNSKDLPAMPDHLSEDGKDFIRQCLQRNPVHRPSAAQLLLHPFVKKATLGRPILSADPSEAKPDFVNAMRSLAIGPAKHNLALVSEAAGTYLSRSSRTGSGSSEAHTPRNISCPVSPPAGSPLLPPRLLHVTGRLSPSPISSPHTASGSSTPLTGGIGAVPFHLTKQPIFSHEGINVIQRPQNALNSNGSTAYQEPNCDPLWRILKSTFACPDIVSSNNDALGNHNRRVGQGLPREFYDGKSYLADGVSQQLLNDHMADDLQSCQNCSFSFDPTLTQVRRTKWPI 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02207 892 MobiDBLite consensus disorder prediction 1 112 - -
Gma01g02207 892 SUPERFAMILY Protein kinase-like (PK-like) 393 733 IPR011009 -
Gma01g02207 892 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 798 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 8 31 - -
Gma01g02207 892 ProSiteProfiles Protein kinase domain profile. 395 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02207 892 ProSitePatterns Protein kinases ATP-binding region signature. 401 424 IPR017441 GO:0005524
Gma01g02207 892 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 798 - -
Gma01g02207 892 Pfam Protein kinase domain 396 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02207 892 CDD STKc_MEKK1_plant 394 651 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 46 68 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 83 111 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 126 198 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 700 717 - -
Gma01g02207 892 SMART serkin_6 395 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02207 892 MobiDBLite consensus disorder prediction 742 761 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 700 761 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 333 354 - -
Gma01g02207 892 MobiDBLite consensus disorder prediction 135 181 - -
Gma01g02207 892 Gene3D Transferase(Phosphotransferase) domain 1 393 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02207 Gma-Chr1 57292628 57298565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02207 4 864 MAP Kinase Kinase Kinase AT1G63700 58.446 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma01g02207 Pkinase 8.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02207 K20717 - gmx:100777350 1667.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02207 01 57292628 57298565 Gma01g02207 01 57292628 57298565 ECH