Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02194 ATGGGTAAAAAGTTTGAGGGTTGGGAGTGTAGTTTGCAGTGCAGTGGGAACCTTTCGCCTCAGGCACACTATCCGATGAGGAGGTTGGAAGAAGAAGGAAGAGATTCAGAGGGCAAGAAAGTGGTTTTGAGCGTTATGGGAATGAGTTGCGCTGCTTGTGCCGGATCCATTGAGAAAGCCATCAAACGCTTACCTGGGATTCGAGAGGCCGTTGTTGATGTCTTGAACCATAAAGCTCAGGTTCTTTACTACCCACAAATGCTTCACGAGCAGAGGATACGTGAGGCCATAGAAGATGCCGGATTTGAGGCCAAAGTCATGGAAGAGGACTCGAAAGACACCTCCACTCAAATATGCCGAATACACGTACGAGGCATGACTTGCACTTCTTGCTCCTCCACCATTGAATCTGCTCTGCAATCCCTTCATGGGGTGCATAAGGCACGAGTGGCCTTAACAACTGAAGAAGCTGAAGTCTGCTACGACCCTAAGATTGTCACCCACAACCACTTCATGAGTGCCATTGAAGAAACCGGGTTTGAAGCCGTACTAATAAGCACAGGGGAACACATAACCAAGATTGAACTTCAAATTGATGGCATTAAAAATGAGCAATCCCTGAATGTCATTGAACGCTCTCTCCATGAACTTCCAGGTGTTGAAACCATAGACATATATCCAGACATCAACAAAATTTCCATCACTTATAAGCCGTACATGACAGGACCAAGAACCTTCATAGAAGTCATAGAATCCACAGGCTCTGGGTGTTTTAAAGCGATTATATTCCCAAATGATGGAGGAAGAGAAGCACAAAGACAGGAGGAAATTAATCGGTTCTTCAAGTTATTCATATGGAGTTTGGCTTTCACCATTCCTGTTTTCTTGACATCCATGGTTCTCATGTATATACCTGGAGTTAAACGTGTTTTGGATATCAAAGTTGTCAATATGTTGAATATTGGACTTCTCTTGAGGTGTGAATTTGCTACCCCGGTGCAGTTCATCATAGGGAGAAGGTTCTATGTTGGGGCATATAAAGCGTTGCGCAAAGGTTCTGCCAACATGGATGTGTTGATAGCCTTAGGGACCAATGCAGCATATTTCTATTCTCTTTATGTTGTGGAAAGAGCTGCTTCCTCACGGCATTTCAAAGGCAGCGATTTCTTTGAGACTAGCTCTATGCTTATTTCATTTATTCTATTAGGGAAGTATTTGGAAGTGTTGGCAAAGGGGAAGACATCTCAGGCCATTGCAAAGCTGATGAACTTGACACCCGAGACAGCAACCTTATTAACACAAGATGATGAGGGAAATGTGGTTAGTGAAAGACAAATTGATAGCCGGTTGATACAAAAGGAGGATGTGATCAAGGTTGTTCCTGGTGCAAAAGTAGCATCGGATGGTTTTGTCATATGGGGACAAAGTCATGTAAATGAGAGCATGATAACTGGAGAGGCAAAGCCTGTGGCGAAGAGGAAGGGTGATATGGTTATTGGAGGCACTCTGAATGAGAATGGGGTTTTGCACGTTAAGGTGACAAGGGTTGGATCAGAGAGTGCTCTCTCGCAGATTGTTCGACTTGTTGAGTCTGCCCAAATGGCTAAAGCTCCTGTCCAAAAAATTGCTGATCATATTTCTAAATATTTTGTTCCTATGGTCATTGCGCTTTCTCTTTCAACATGGCTTTCCTGGTTTCTGGCTGGAAAGTTCCATGCATACCCAAAATCTTGGATACCATCTTCCACAAACAGCTTTGAGCTTGCACTTCAGTTTGGGATTTCAGTCATGGTCATTGCCTGCCCTTGTGCTCTAGGCCTAGCCACTCCTACGGCTGTTATGGTCGGTACTGGAGTTGGTGCAACACAAGGTGTGTTGATCAAAGGGGGGCAAGCATTAGAAAATGCACACAAGGTGAATTGCATTGTGTTTGATAAGACAGGGACCCTCACAGTTGGGAAGCCAGTGGTTGTTACTACAAAACTCTTAAAAAAGACGTCACTTAGTAATTTCTATGAATTTGCTGCTGCAGCAGAGGTGAACAGCGAACATCCAATAGCCAAGGCCATTGTTGAGCACGCCAAAAAGATTATAGAAGAAGAACAAAATCATCCCTGGCCAGAAGCACGCGACTTTGCTTCTGTTTCAGGCCACGGAGTGAAGGCCATTGTTCTAAACAAGGAAATAATGGTTGGGAATAAAAAGATGATGTTGGATCATAACATAGCCATTTCAGCAGAAGCTGAAGAAACACTAGCAGAAGCTGAAAGCTTGGCTCAAACCGGGATTCTAGTATCCTTGGATGGAGAAGTTGCTGGAGTTTTGGCTGTATCTGATCCACTAAAACCTGGTGCCAAAGAAGTTATTTCCATTCTTAATTTGATGAAGATCAAGAGCATCATGGTGACAGGTGATAACTGGGGAACTGCCAACTCCATAGCAAGACAAGCTGGCATTGAAACTGTCATGGCAGAGGCTCTACCTGAGACTAAAGCGACCAAAATAAAAGAATTGAAGAGTTCTGGGTACACGGTGGCAATGGTGGGAGATGGAATAAACGATTCACCAGCACTAGTGGCTGCTGATGTAGGAATGGCAATTGGTGCTGGCACAGACATAGCTATAGAGGCAGCTGACATTGTTCTGATGAAGAGCAACTTGGAGGATACAATAATTGCCATTGATCTTGCAAAAAAAACTTTCTCTCGTATACGTCTCAATTACATTTGGGCTTTGGGTTACAATTTGCTAGCCATCCCAATTGCCGCGGGTGTCCTTTACTCCTCCACTAGATTCCGATTACCACCATGGATTGCTGGGGCTGCAATGGCTGCCTCTTCTCTCAGTGTTGTCTGCTCATCCCTCTTGTTAAAAAATTACAGGAGACCCAGCCTGCTAAACAACTTGGACATGAATGCTATCAAGATTGAATAA 2934 0.4407 MGKKFEGWECSLQCSGNLSPQAHYPMRRLEEEGRDSEGKKVVLSVMGMSCAACAGSIEKAIKRLPGIREAVVDVLNHKAQVLYYPQMLHEQRIREAIEDAGFEAKVMEEDSKDTSTQICRIHVRGMTCTSCSSTIESALQSLHGVHKARVALTTEEAEVCYDPKIVTHNHFMSAIEETGFEAVLISTGEHITKIELQIDGIKNEQSLNVIERSLHELPGVETIDIYPDINKISITYKPYMTGPRTFIEVIESTGSGCFKAIIFPNDGGREAQRQEEINRFFKLFIWSLAFTIPVFLTSMVLMYIPGVKRVLDIKVVNMLNIGLLLRCEFATPVQFIIGRRFYVGAYKALRKGSANMDVLIALGTNAAYFYSLYVVERAASSRHFKGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMNLTPETATLLTQDDEGNVVSERQIDSRLIQKEDVIKVVPGAKVASDGFVIWGQSHVNESMITGEAKPVAKRKGDMVIGGTLNENGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKIADHISKYFVPMVIALSLSTWLSWFLAGKFHAYPKSWIPSSTNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALENAHKVNCIVFDKTGTLTVGKPVVVTTKLLKKTSLSNFYEFAAAAEVNSEHPIAKAIVEHAKKIIEEEQNHPWPEARDFASVSGHGVKAIVLNKEIMVGNKKMMLDHNIAISAEAEETLAEAESLAQTGILVSLDGEVAGVLAVSDPLKPGAKEVISILNLMKIKSIMVTGDNWGTANSIARQAGIETVMAEALPETKATKIKELKSSGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDTIIAIDLAKKTFSRIRLNYIWALGYNLLAIPIAAGVLYSSTRFRLPPWIAGAAMAASSLSVVCSSLLLKNYRRPSLLNNLDMNAIKIE 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02194 977 TIGRFAM TIGR00003: copper ion binding protein 121 182 IPR006122 GO:0005507
Gma01g02194 977 TIGRFAM TIGR00003: copper ion binding protein 40 104 IPR006122 GO:0005507
Gma01g02194 977 SUPERFAMILY HMA, heavy metal-associated domain 115 189 IPR036163 GO:0046872
Gma01g02194 977 Pfam E1-E2 ATPase 424 621 - -
Gma01g02194 977 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 396 930 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma01g02194 977 CDD HMA 123 182 IPR006121 GO:0046872
Gma01g02194 977 Pfam Heavy-metal-associated domain 121 181 IPR006121 GO:0046872
Gma01g02194 977 Pfam Heavy-metal-associated domain 43 103 IPR006121 GO:0046872
Gma01g02194 977 CDD P-type_ATPase_Cu-like 284 944 - -
Gma01g02194 977 Gene3D - 610 905 IPR023214 -
Gma01g02194 977 Gene3D - 411 533 - -
Gma01g02194 977 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 31 968 - -
Gma01g02194 977 PRINTS P-type cation-transporting ATPase superfamily signature 479 493 - -
Gma01g02194 977 PRINTS P-type cation-transporting ATPase superfamily signature 643 657 - -
Gma01g02194 977 PRINTS P-type cation-transporting ATPase superfamily signature 773 784 - -
Gma01g02194 977 PRINTS P-type cation-transporting ATPase superfamily signature 795 805 - -
Gma01g02194 977 PRINTS P-type cation-transporting ATPase superfamily signature 848 867 - -
Gma01g02194 977 PRINTS P-type cation-transporting ATPase superfamily signature 871 883 - -
Gma01g02194 977 CDD HMA 42 105 IPR006121 GO:0046872
Gma01g02194 977 PANTHER ATP7, ISOFORM B 31 968 - -
Gma01g02194 977 PRINTS Copper-transporting ATPase 1 signature 40 65 - -
Gma01g02194 977 PRINTS Copper-transporting ATPase 1 signature 66 89 - -
Gma01g02194 977 PRINTS Copper-transporting ATPase 1 signature 95 115 - -
Gma01g02194 977 PRINTS Copper-transporting ATPase 1 signature 141 162 - -
Gma01g02194 977 SUPERFAMILY Calcium ATPase, transduction domain A 443 529 IPR008250 -
Gma01g02194 977 ProSiteProfiles Heavy-metal-associated domain profile. 40 106 IPR006121 GO:0046872
Gma01g02194 977 ProSitePatterns E1-E2 ATPases phosphorylation site. 645 651 IPR018303 -
Gma01g02194 977 SUPERFAMILY HMA, heavy metal-associated domain 37 110 IPR036163 GO:0046872
Gma01g02194 977 Gene3D - 729 779 IPR023299 GO:0000166
Gma01g02194 977 Gene3D - 650 728 IPR023299 GO:0000166
Gma01g02194 977 ProSitePatterns Heavy-metal-associated domain. 123 152 IPR017969 GO:0046872
Gma01g02194 977 ProSiteProfiles Heavy-metal-associated domain profile. 193 254 IPR006121 GO:0046872
Gma01g02194 977 SUPERFAMILY HAD-like 642 954 IPR036412 -
Gma01g02194 977 ProSitePatterns Heavy-metal-associated domain. 45 74 IPR017969 GO:0046872
Gma01g02194 977 SUPERFAMILY Calcium ATPase, transmembrane domain M 394 636 IPR023298 -
Gma01g02194 977 CDD HMA 210 254 IPR006121 GO:0046872
Gma01g02194 977 Gene3D - 188 261 - -
Gma01g02194 977 SUPERFAMILY HMA, heavy metal-associated domain 188 257 IPR036163 GO:0046872
Gma01g02194 977 Gene3D - 34 107 - -
Gma01g02194 977 Pfam haloacid dehalogenase-like hydrolase 639 862 - -
Gma01g02194 977 SFLD C1.7: P-type atpase like 625 898 - -
Gma01g02194 977 ProSiteProfiles Heavy-metal-associated domain profile. 118 184 IPR006121 GO:0046872
Gma01g02194 977 Gene3D - 116 187 - -
Gma01g02194 977 SFLD p-type atpase 625 898 IPR044492 -
Gma01g02194 977 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 356 957 IPR027256 GO:0006812|GO:0016021|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02194 Gma-Chr1 57193098 57200907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02194 35 977 Primary Pumps ATPases AT1G63440 71.595 0.0 1414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02194 K17686 - gmx:100817431 1836.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02194 01 57193098 57200907 Gma01g02194 01 57193098 57200907 ECH