Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02191 ATGAAGCCTTGCACTTTGTTGTTGTTTCTCAGTTTTATCTCCACGCTCTCTTTTGTGGTTTCTGACACAGTGCCCTCAAACGAAGTTTGGGCGCTTAGGAGCTTCAAAGAAGCTGTCTATGAAGACCCATATCAAGTTTTATCCAATTGGGATACGGTGGAATCAGATCCTTGTAACTGGTTTGGCGTCTTATGCACTATGGTTCGAGATCATGTCATCAAGCTAAACATATCAGGATCATCATTAAAGGGGTTTCTTGCACCAGAGCTGGGGCAAATCACCTACTTGCAGGCACTAATTTTGCATGGCAACAATTTCATTGGAACAATACCTAGAGAGTTGGGTGTGTTGGAATCTCTCAAGGTGTTGGATTTGGGAATGAACCAATTAACGGGACCAATTCCTCCAGAGATTGGAAATCTAACCCAAGCTGTGAAAATAAACTTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCCGGAGCTTGGAAACTTGAGATACCTTCAAGAACTTCGGCTGGATAGGAATAGGCTTCAAGGACCTATTCCTGCTGGTGGTAGCTCAAATTTTGCTTCAAATATGCATGGGATGTATGCATCAAAGGAGaatgtaactggcttctgtcgttcgtctcagttgaaagtagcagacttctcatttaattttttagttggtaggatacccaaatgcttggagtatcttccaagCAGGTTAAGCTTTCAAGGGAATTGCCTCCAGGGTCAGGAGTTAAAGCAGCGGTCTTCTATACAGTGTGCGGGTGCCTCACCTGCCAGTGCCAAGAGCCAGCCAGTGGTGAATCCAAATCACCAACCTGCTGAATATGTGTCCAAGCATCACAGAGCATCGAAGCCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGAACTATGGTGGGCTCTCTCTTTCTGGTTGCTGTTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATTATTCCTTGGAAAAAATCTGGAAGCCAAAAAGATCATACAGCAGTATATATAGACCCTGAGTTTTTGAAGGATGTGAGAAGGTATAGCAGACAGGAGCTTGAAGTTGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTGTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTACTGGGCTATTGTAGAGAGGACACTCCATTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGATCACTTACATTGTTATGAAGAAGGATGTCAATTCTCTTGGACACGGCGTATGAAGATTGCCATAGGTATTGCACGTGGACTCAAGTATTTGCATACAGAAGTGGAGCCTCCATTCACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAATTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACATATTTGCTTTTGGGGTACTTCTGCTAGAGATAATCAGCGGGAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTATCTTGAAATGCCAGATGAAATGTCATGTGTAGTGGATCCTGAAATGAAATTTTTTAGATATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTTTGTGTCAATCCTGATACAACTGTGCGCCCATCTATGCGAGAATTATGTAGCATGCTGGAGAGCAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCGTAA 1995 0.41 MKPCTLLLFLSFISTLSFVVSDTVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNWFGVLCTMVRDHVIKLNISGSSLKGFLAPELGQITYLQALILHGNNFIGTIPRELGVLESLKVLDLGMNQLTGPIPPEIGNLTQAVKINLQSNGLTGRLPPELGNLRYLQELRLDRNRLQGPIPAGGSSNFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGRIPKCLEYLPSRLSFQGNCLQGQELKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEFLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNIFAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPDEMSCVVDPEMKFFRYEDLKVICEVITLCVNPDTTVRPSMRELCSMLESRIDTSVSVELKSSSLAWAELALLS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02191 664 Pfam Protein tyrosine and serine/threonine kinase 369 638 IPR001245 GO:0004672|GO:0006468
Gma01g02191 664 Gene3D Phosphorylase Kinase; domain 1 339 446 - -
Gma01g02191 664 ProSiteProfiles Protein kinase domain profile. 365 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02191 664 SUPERFAMILY Protein kinase-like (PK-like) 343 639 IPR011009 -
Gma01g02191 664 SUPERFAMILY L domain-like 26 236 - -
Gma01g02191 664 PANTHER PROTEIN MALE DISCOVERER 2 5 662 - -
Gma01g02191 664 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 662 - -
Gma01g02191 664 Gene3D Transferase(Phosphotransferase) domain 1 447 654 - -
Gma01g02191 664 Gene3D Ribonuclease Inhibitor 26 206 IPR032675 -
Gma01g02191 664 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02191 Gma-Chr1 57174713 57178948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02191 9 639 Receptor kinase-like Gene Family AT5G16000 27.439 4.83e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma01g02191 PK_Tyr_Ser-Thr 4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02191 - - gmx:100794714 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02191 01 57174713 57178948 Gma01g02191 01 57174713 57178948 ECH
Gma01g02191 01 57174713 57178948 Gma11g00226 11 1763403 1768362 GST
Gma01g02191 01 57174713 57178948 Gma05g02020 05 41531480 41536077 PCT
Gma01g02191 01 57174713 57178948 Gma08g00125 08 1067146 1071369 PCT