Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02190 ATGGCTAGTAACACAAACACCAACAACAGCAACAAGAAGGAGAAAGACCTTGAGTTTTTCTTTGAGGAAGATATCAACGAATTGGGTGCACAACAAATGGATGCTGAAACTGCCAAGTTAGAGAGTGAGAGTAGCAGCAGCGATGACGAGGGAAATGATACAACACGCCGTCACTCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACAACAGATTCTTACACACTTGCCGCAACTCCAAATTTTGAATCAATTCTACGAGTTCCAAGTATTATATATTCCAGTTTTGAAAGTCGTTCAAAGAATAACTTGGACATAGATGGAAAGACTCCTTTTCTCTCTGGTCACGAAGGCATTACTCAATCAACATCGTGGAAGGAAGGTTTAGTGCAAAAACATTTATCTGGTGAATTACCCATTGGTCGTGAGTGCAGCTTTCTTCAAACAGTTTTCAATGCGACTAATGTGATGGCTGGAGTCGGTATTCTGTCTACACCTTATACATTGAAAGAAGCTGGGTGGATGAGCATGGTGTTGATGGTTCTTTTTGCAGTCATTTGTTGTTATACAGCCACCCTTATGAGATATTGCTTTGAAAGCAGAGAAGGAATCACTAGCTATCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGTATTATTGTCTCAATCATATTGTACACTGAATTATATTCATGTTGTGTGGAATTCATCACCTTGGAAGGAGACAACCTCACTGGGCTATTCCCAGGAACATCCTTAGATTTGGGTAGTTTTCGGTTAGACTCTGTGCACTTGTTTGGAATTTTGGCGGCACTTATCATTATCCCCACTGTTTGGTTGAAGGATCTTCGTATAATCTCTATTTTGTCAGCTGGAGGAGTTTTTGCAACACTGTTGATTGTTGTATGTGTGTTTTGTGTTGGGACAATAAATGGTGTTGGATTCCATCACACTGGTCAATTGGTCAATTGGAGTGGCATTCCATTAGCTATTGGTATCCATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATTTATCAATCTATGGCAGACAAAAGACAATTTACTAAAGCACTAATAATATGTTTTGTATTGTCTATCACAATATATGGAGGTGTTGCAATCATGGGATTTCTCATGTTTGGTGGTGAGACTTTGTCTCAAATAACATTAAATATGCCACGAGATGCATTTGCTTCCAAGGTTGCATTTTCAGGAATAATTTTAGTCTGCTTTTCCTTAACTATACGCAAATATGCTTTGTTGATGAACCCATTGGCGAGAAGTCTCGAAGAGTTGCTACCAGATAGAATCTCAAGTACTTATCGATGTTTCATTCTTCTTAGAACAGCACTTGTTGTATCTACCGTTTGTGCTGCTTTTCTTATTCCTTTTTTTGGGTTTGTGATGGCTTTAATTGGTTCTCTCTTCAGTGTACTTGTGTCAGTGATAATGCCAAGTTTATGTTTTATGAAAATTGTGGGAAAAAAAGCAACTGCTACACAGGTTGCGTTGAGCGTTGTAATTACTACATTTGGAGTCATTTGTGGGATTCTAGGAACATATTCATCTGTGCAGAATATTGTCAACAGTTACTGA 1617 0.3865 MASNTNTNNSNKKEKDLEFFFEEDINELGAQQMDAETAKLESESSSSDDEGNDTTRRHSFTSQQWPQSYKETTDSYTLAATPNFESILRVPSIIYSSFESRSKNNLDIDGKTPFLSGHEGITQSTSWKEGLVQKHLSGELPIGRECSFLQTVFNATNVMAGVGILSTPYTLKEAGWMSMVLMVLFAVICCYTATLMRYCFESREGITSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFITLEGDNLTGLFPGTSLDLGSFRLDSVHLFGILAALIIIPTVWLKDLRIISILSAGGVFATLLIVVCVFCVGTINGVGFHHTGQLVNWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKRQFTKALIICFVLSITIYGGVAIMGFLMFGGETLSQITLNMPRDAFASKVAFSGIILVCFSLTIRKYALLMNPLARSLEELLPDRISSTYRCFILLRTALVVSTVCAAFLIPFFGFVMALIGSLFSVLVSVIMPSLCFMKIVGKKATATQVALSVVITTFGVICGILGTYSSVQNIVNSY 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02190 538 MobiDBLite consensus disorder prediction 26 68 - -
Gma01g02190 538 Pfam Transmembrane amino acid transporter protein 146 530 IPR013057 -
Gma01g02190 538 PANTHER AMINO ACID TRANSPORTER AVT1A 38 536 - -
Gma01g02190 538 MobiDBLite consensus disorder prediction 41 56 - -
Gma01g02190 538 PANTHER OS05G0424000 PROTEIN-RELATED 38 536 - -
Gma01g02190 538 Gene3D Amino acid/polyamine transporter I 143 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02190 Gma-Chr1 57161142 57167745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02190 6 473 Amino Acid or Auxin Permease AAAP Family AT2G41190 59.459 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02190 K15015 - gmx:100816368 1011.52