Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02177 ATGGGTAAGGCTTCCAAATGGTTTCGCGGCCTTCTCGGTCTCAAAAGACCAGACTCGCCGTCTCCCAAAGAAAAACGCCGCTGGACCTTCGTCAAGTCCTACAGAGAAAAGGACCCCACCCGCATCGTAGCCGCCACCCCCCGCCGCTGCCCTGCCACCACCGCCGGAGGCAATACTCCTGAAGAATGGGCTGCCGTCAAGATTCAAGCTGCCTTTCGAGGCTCTTTGGCAAGGAAAGCCCTTCGAGCGTTGAAAGGATTGGTGAAGCTACAGGCATTAGTGAGAGGTCACATTGAGAGGAAGCGCACAGCAGAGTGGCTGCAAAGAGTGCAAGCACTCTTACGTGTACAGGCCCAAATCCGTGCTGGCCGGGCCCAAATTTTGCACTCCCCCTCTTCCACTTCCCACCTCCGTGGTCCAGCTACACCAGACAAATTTGAAATCCCCATCAGATCCGAGAGCATGAAATATGATCAGTACTCGTCACCACTACTCAAGAGAAACAGCTCTAAATCCCGTGTACAGATCAATGGCGGCAATCAAGAGAGATGCAGGAGTAGATCATCAGATAGTCGCATTGATGAACAACCATGGACTCAACGAAGATCATGGACCAGAGGCTGTAGTATGGATGAAGAGAGAAGTGTGAGGATTCTAGAAATTGATTCTGTAAAACCACACGTGACATCAAAACGTAGAAACCTCTTCTACTCCCCTAGCCAAGCTATGGTTGTTTCGGATCATTACAGTGGGTGTAATTTAACCACCACAAGTCCATCTTCTTATAATAGCCCTCTAAAAATCAACGAGCTTGAGGAGAGTTCATTTTGCGCTGCTGATAATAGTCCTCAAGCTTTATCTTTATCTTCCTCTTCTAAAGATGGTGCCTCCAAAAGAAGCCCTCTTACTCCTACCAGGAGTGATGGCTCAAGAAGCTTCTTAAGTGGTTATTCTGAACCAAACTATCCAAGTTACATGGCTTACACAGAGTCTTCAAAGGCAAAGTTAAGATCTCTGAGTGCTCCAAAGCAGAGGCCACAGTATGAGAGGTGTAGTTCATCAAACAGGTACTCGCTTCATGGATTGGCCACACAAAGGATAGCCGCATTACACGCAAGCTTCACTAACAAAGCTTACCCTGGTTCTGGTCGTTTGGACAAGCTTGGAATGCATGTCCCGTATAAATACTGA 1191 0.4819 MGKASKWFRGLLGLKRPDSPSPKEKRRWTFVKSYREKDPTRIVAATPRRCPATTAGGNTPEEWAAVKIQAAFRGSLARKALRALKGLVKLQALVRGHIERKRTAEWLQRVQALLRVQAQIRAGRAQILHSPSSTSHLRGPATPDKFEIPIRSESMKYDQYSSPLLKRNSSKSRVQINGGNQERCRSRSSDSRIDEQPWTQRRSWTRGCSMDEERSVRILEIDSVKPHVTSKRRNLFYSPSQAMVVSDHYSGCNLTTTSPSSYNSPLKINELEESSFCAADNSPQALSLSSSSKDGASKRSPLTPTRSDGSRSFLSGYSEPNYPSYMAYTESSKAKLRSLSAPKQRPQYERCSSSNRYSLHGLATQRIAALHASFTNKAYPGSGRLDKLGMHVPYKY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02177 396 MobiDBLite consensus disorder prediction 163 198 - -
Gma01g02177 396 ProSiteProfiles IQ motif profile. 85 112 IPR000048 GO:0005515
Gma01g02177 396 MobiDBLite consensus disorder prediction 286 315 - -
Gma01g02177 396 PANTHER IQ-DOMAIN 5-RELATED 53 391 - -
Gma01g02177 396 Gene3D - 6 86 - -
Gma01g02177 396 MobiDBLite consensus disorder prediction 1 27 - -
Gma01g02177 396 Pfam Protein of unknown function (DUF4005) 282 359 IPR025064 -
Gma01g02177 396 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
Gma01g02177 396 PANTHER CALMODULIN BINDING PROTEIN IQD22 53 391 - -
Gma01g02177 396 MobiDBLite consensus disorder prediction 163 184 - -
Gma01g02177 396 Pfam IQ calmodulin-binding motif 88 102 IPR000048 GO:0005515
Gma01g02177 396 Pfam IQ calmodulin-binding motif 63 82 IPR000048 GO:0005515
Gma01g02177 396 SMART iq_5 83 104 IPR000048 GO:0005515
Gma01g02177 396 SMART iq_5 60 82 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02177 Gma-Chr1 57062815 57065915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02177 1 47 IQD Protein Family AT4G23060 50.000 6.19e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01216 17 10678628 10682741 Gma01g02177 01 57062815 57065915 PCT
Gma05g00461 05 4381589 4384694 Gma01g02177 01 57062815 57065915 PCT