Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02161 atgcctcggGTGCATGGTTATAGAAGGTCATTGAGTGAGTTTAACTGGAGACAATATGCAGCAGAAGAGGTAACTGAAATGAAAAGTCATCTATTAAAATATCCGCTTGAAGTTGATTCAAAGGGCAAAGTGAAGCCTCTTTTTGGCTGTGAGGCATTCCCAGACGTTGGTGGGAACATAAGTGGCACCTTCACCTTATCAGGACTCAGAAAATATCGCCATCTGATCATATATGTGAGTTCTTAA 246 0.3902 MPRVHGYRRSLSEFNWRQYAAEEVTEMKSHLLKYPLEVDSKGKVKPLFGCEAFPDVGGNISGTFTLSGLRKYRHLIIYVSS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02161 81 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 9 65 - -
Gma01g02161 81 Pfam Phospholipase D C terminal 10 63 IPR024632 -
Gma01g02161 81 PANTHER PHOSPHOLIPASE D 9 65 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02161 Gma-Chr1 56907079 56908005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02161 9 64 Phospholipase D Gene Family (Wang group) AT4G11850 71.429 3.11e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02161 K01115 - gmx:100786241 122.864