Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02142 ATGGATCCTATTACAGCACACGGTCATTCTCTTCCCCCTCCTTTCCACGCAGGAAGAGATCTCCACCTCCACCAGCAACAACACCAGTTCCACTCCTTACAAGAAGACGAGCAGAGCGGAAGCAGCGGAGGCCTAAACCTCGCACACAAAAGGGAACACGAAGAAAACAACAACAACAACAGCAGCGATGGCAAAGAAGGTGGAGGTGCTGGCTCCGGCGAAACCGAAATTTCAAGAAGACCTCGCGGAAGACCCGCCGGATCCAAGAACAAGCCCAAACCCCCCATCATCATCACGCGCGACAGCGCCAACGCCCTCAAAACCCACGTCATGGAAGTCGCCGACGGCTGCGACATCGTCGATAGCGTCTCCGCCTTCGCCCGCCGCCGCCAGAGAGGGGTTTGCATCATGAGCGGCACCGGAACGGTCACCAACGTCACCCTGAGGCAACCGGCTTCTTCCGGCGCCGTCGTCACTCTCCACGGAAGGTTCGAGATCTTGTCCCTCGCCGGGTCCTTCCTGCCCCCTCCTGCGCCGCCTGCAGCCTCCGGTTTGACCATATACCTCGCCGGAGGACAAGGCCAAGTCGTCGGAGGAAGCGTGGTTGGCGCACTAATCGCTTCGGGGCCCGTGGTTATCATGTCAGCTTCGTTTAGCAACGCTGCGTATGAGAGGCTTCCTTTGGAAGATGAAGACCCTTCGATGGCGCTTCAGGGAGGTGGTTCGATTGGGTCACCGggaggtggcggtggaggtggcggtggCGTTGGTCAACAGCAGCCATCTCAGCAGCTTATGGGGGATTCCACTGCGCCTCTTTTCCATGGTTTGAATCCCAATCTTCTGAATTCGGTTCAGATGCCGTCCGAGACTTTCTGGGCAACGGGTCGCTCTCCATACTGA 903 0.5626 MDPITAHGHSLPPPFHAGRDLHLHQQQHQFHSLQEDEQSGSSGGLNLAHKREHEENNNNNSSDGKEGGGAGSGETEISRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVDSVSAFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDEDPSMALQGGGSIGSPGGGGGGGGGVGQQQPSQQLMGDSTAPLFHGLNPNLLNSVQMPSETFWATGRSPY 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02142 300 MobiDBLite consensus disorder prediction 232 271 - -
Gma01g02142 300 ProSiteProfiles PPC domain profile profile. 103 240 IPR005175 -
Gma01g02142 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 220 IPR005175 -
Gma01g02142 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 300 - -
Gma01g02142 300 CDD DUF296 107 174 IPR005175 -
Gma01g02142 300 Gene3D - 106 235 - -
Gma01g02142 300 PIRSF ESCAROLA 17 299 IPR014476 GO:0003680
Gma01g02142 300 MobiDBLite consensus disorder prediction 1 97 - -
Gma01g02142 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 232 - -
Gma01g02142 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 300 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02142 Gma-Chr1 56751618 56753735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02142 9 300 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 59.177 2.27e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02142 - - gmx:100781436 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02142 01 56751618 56753735 Gma11g00264 11 2096157 2097395 GST