Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02124 ATGGCCACGCTTAGCTTTGGAATAGCCACGACAAGTCTGAGTGCTGCCGCTGGTTATCGTAGAAGAAGACCCACAATTGTGTGTATTGGATGGTCTCGTGATGTTCCCGATACTCCGCAATACCTCATCGAATACTTCCTCGACACTGAAGCTCAGGAGATTGAGTTTGAGATTGCAAGAATGAGACCGCGATTGAATGAGGAATTCTTTGCACAACTCAAATTCGAGTTAACAAAACACAGGTTCCTACACATGGAGGATAGACAGATTGAGCTGGAGGCTCTAGAGAAAGCCATACAAGAAGGATTAGCCAGGGCAAACCTAACTAAAATCTTGACATCCAAGGATGTCAAAGCAACTTTGCTGGAGATGGTTGAAAAGAATGAAATTAATAGATCTTTATTGGCACTTCAAGATGAAAACATAGCAAGTGCACAAAAGGGCAACCAGAAACAGGCTGCAGAATACATGGAGAAGCTCCGCGGGGCTGTTCTTAGCGCAGAATCTTCCATCGGCAGAAAGTCCAATCCTAACCCAGAAGAGTTCGTGAAGTCCTCGTGCAGGGCAACACGGTACCCTGTTCTATGCGTCAAGTCTCTGTTGGCCTACGCAAGCGTGATTCGCCGAAGCGACCGACAACTAGCCACGACCGCTCTGTCGGTAAGCATATCGAGGAGCCGATCCTCCGCATGGTTGGTGAAGAAGATGTTGAAAGCGAGAGGCATGAAGCCTAGAGAATACAGAGCGGTGCAAGACTGCGTGGAGAACATTGGTGACAGCGTGGACCGTCTCAGGCAATCGGTTACGGAGTTGGGGCGGACGGGCGAGGACTTCGTCTGGCACATGAGCAACGTCCAGACTTGGGTCAGCGCTGCCCTCACCGACGACAGCACTTGTCTTGACGGCTTCGCTGGTTCCGCCATGAACGGAAACGTGAAGGCTCTTATAAAGGACAGGATTGTCCACGTTGCTCAAGTCACAAGCAACGCTCTCGCTTTGGTTAACCGCTTTGCCTCAAGACACCCAAGTGCTACTCAAACTCCTTAA 1047 0.4976 MATLSFGIATTSLSAAAGYRRRRPTIVCIGWSRDVPDTPQYLIEYFLDTEAQEIEFEIARMRPRLNEEFFAQLKFELTKHRFLHMEDRQIELEALEKAIQEGLARANLTKILTSKDVKATLLEMVEKNEINRSLLALQDENIASAQKGNQKQAAEYMEKLRGAVLSAESSIGRKSNPNPEEFVKSSCRATRYPVLCVKSLLAYASVIRRSDRQLATTALSVSISRSRSSAWLVKKMLKARGMKPREYRAVQDCVENIGDSVDRLRQSVTELGRTGEDFVWHMSNVQTWVSAALTDDSTCLDGFAGSAMNGNVKALIKDRIVHVAQVTSNALALVNRFASRHPSATQTP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02124 348 Coils Coil 85 105 - -
Gma01g02124 348 Pfam Plant invertase/pectin methylesterase inhibitor 182 333 IPR006501 GO:0004857
Gma01g02124 348 Gene3D Invertase/pectin methylesterase inhibitor family protein 179 337 IPR035513 -
Gma01g02124 348 PANTHER PECTINESTERASE INHIBITOR 9 169 341 - -
Gma01g02124 348 CDD PMEI-like_3 185 339 - -
Gma01g02124 348 SMART PMEI_2 178 333 IPR006501 GO:0004857
Gma01g02124 348 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 181 337 IPR035513 -
Gma01g02124 348 TIGRFAM PME_inhib: pectinesterase inhibitor domain 174 335 IPR006501 GO:0004857
Gma01g02124 348 PANTHER PECTINESTERASE INHIBITOR-LIKE 169 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02124 Gma-Chr1 56618131 56622634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02124 173 334 Carbohydrate Esterase AT3G14310 34.337 1.17e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02124 - - gmx:100776636 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02124 01 56618131 56622634 Gma11g00280 11 2224270 2226200 GST