Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02110 ATGACTTCTTCTTCACTCTTGGTGTCACTGCAAGTAGCGCTTGCGGTTTTCGCTTGCATATTCCATGCAGCAACAGTGACATGTAAACCTCACCACCGCGACCGTACCTTAAAAATATTCTCTTCTACGAGCAACTCCTCAAAGAGTAGCCACCATTGGATCGGACCCATTGGTCACCGTAAAATCACCGTTGACATTAACGGCGGTGGCCACTACCGGTCCGTCCAAGACGCCGTCAATGCCGTCCCCGACAACAACCGAAGGAATGTCCTTATTCAAATCAACGCCGGATGCTACAAAGAAAAGGTAGTTGTGCCCGTGACGAAGCCGTACATAACTTTTGAGGGCGCGGGTAAAGAAGTGACGGTGATAGAATGGCATGATCGAGCAAGTGACCCTGGTCCTAGCGGACAGCAATTGCGTACTTACAGAACCGCTTCTGTTACTGTTTTTGCCAGCTATTTTTCTGCCAGGAACATCAGCTTCAAGAACACAGCACCTGCACCAATGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGCATATCCGGCGACAAAGCATACTTCTCCGGATGCGGTTTCTACGGTGCACAAGACACCCTTTGCGACGATGCAGGCAGACATTACTTCAAGGAATGCTACATTGAAGGATCCATCGATTTCATTTTTGGCAATGGCAGGTCCATGTACAAGGATTGCGAGCTGCACTCAATAGCAACGAGGTTCGGTTCCATAGCGGCCCACGATAGGAAACAGCCAGAAGAGAAGACAGGGTTCGCATTCGTACGATGCAAGGTGACAGGAACGGGTCCGCTATATGTGGGACGAGCAATGGGACAGTATTCGAGAATTGTCTACTCCTACACATATTTCGATGATATTGTTGCACATGGCGGTTGGGATGATTGGGACCATGCCCACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCTGTACGTGGGGTCTCATGGGCCCGAGACTTAGATTTCGAAGCTGCCCATCCATTTATCAGGAAGAGTTTCGTCAATGGGAGACACTGGATCGCGCCATCAGATGCTTAA 1092 0.5018 MTSSSLLVSLQVALAVFACIFHAATVTCKPHHRDRTLKIFSSTSNSSKSSHHWIGPIGHRKITVDINGGGHYRSVQDAVNAVPDNNRRNVLIQINAGCYKEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKQPEEKTGFAFVRCKVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHAHNKNKTVFFGVYKCWGPGAEAVRGVSWARDLDFEAAHPFIRKSFVNGRHWIAPSDA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02110 363 Gene3D - 58 362 IPR012334 -
Gma01g02110 363 SUPERFAMILY Pectin lyase-like 60 360 IPR011050 -
Gma01g02110 363 ProSitePatterns Pectinesterase signature 2. 216 225 IPR033131 -
Gma01g02110 363 Pfam Pectinesterase 62 354 IPR000070 GO:0030599|GO:0042545
Gma01g02110 363 PANTHER PECTINESTERASE 68-RELATED 20 362 - -
Gma01g02110 363 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02110 Gma-Chr1 56445484 56449163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02110 4 363 Carbohydrate Esterase AT5G47500 71.429 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02110 - - gmx:100816190 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02110 01 56445484 56449163 Gma01g02110 01 56445484 56449163 ECH
Gma01g02110 01 56445484 56449163 Gma11g00300 11 2415042 2418011 GST
Gma01g02110 01 56445484 56449163 Gma17g01306 17 11747189 11750283 PCT