Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02085 ATGTACGGACAAAGTAGCTATGAGTCCGATTTGGCCCTTTTGGACTCCATTCGCCGCCACTTACTTGGCGACTCCGAGGAGCACAAATTCGGAGCCCCGAATGTTAGTTCGGGTAACACTCCAGCGTACTCTCGGAGCTCCTGTTTCAGCAGGTTGTACCCTTGCTTGAGTAACGATTGGGGAGAACTTCCTCTTAAGGAAGACGATTCAGAAGACATGCTTCTTTACGGTGTTCTTCGCGATGCAATAAACGCAGGGTGGGTCCCATCTCTCGATGCATCCTCACCGGAGAGTTTCTCGTCGGGTTTCATCCCGGCGGTGACCGTGAAATCCGAACCGGATCTATTTCCGGCGCCAGAGCCTGTCTATATTCCTCCGGCGGCTCAGAAGGCTGAGCCGGCGGTGGTTCCGGCGAAGGGGAAGCACTACCGCGGCGTTCGGCAGCGGCCGTGGGGGAAATTCGCGGCGGAGATCCGCGACCCGGCTAAAAACGGGGCTCGGGTTTGGCTGGGAACGTTCGAAACGGCTGAGGACGCCGCGCTGGCTTACGACCGAGCCGCGTACCGAATGCGCGGCTCGCGCGCTTTGTTGAATTTCCCGCTCCGGATTAATTCAGGCGAGCCCGAACCGGTTCGGGTCACGGCAAAGAGGTATTCGCCGGAGCCGTCGTCTTCTTCGTCGGATAGTGCGTCGTCGACGAAGAGGCGGAAGAAGGTGGTGGGGTCCACGGTGACGGCTCAAAGTGGATTGAGAAAGGAGCAAGTGGGAAGTCAAGTGGCACACAGTGCACACGTGGAGAGCAGTTGTTGGTCAACTAATGCGTGA 825 0.5782 MYGQSSYESDLALLDSIRRHLLGDSEEHKFGAPNVSSGNTPAYSRSSCFSRLYPCLSNDWGELPLKEDDSEDMLLYGVLRDAINAGWVPSLDASSPESFSSGFIPAVTVKSEPDLFPAPEPVYIPPAAQKAEPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTAKRYSPEPSSSSSDSASSTKRRKKVVGSTVTAQSGLRKEQVGSQVAHSAHVESSCWSTNA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02085 274 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Gma01g02085 274 PRINTS Ethylene responsive element binding protein signature 166 182 IPR001471 GO:0003700|GO:0006355
Gma01g02085 274 MobiDBLite consensus disorder prediction 218 274 - -
Gma01g02085 274 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Gma01g02085 274 PANTHER DNA-BINDING DOMAIN 26 250 IPR044808 GO:0003700|GO:0009873
Gma01g02085 274 Pfam AP2 domain 142 192 IPR001471 GO:0003700|GO:0006355
Gma01g02085 274 MobiDBLite consensus disorder prediction 210 274 - -
Gma01g02085 274 CDD AP2 141 200 IPR001471 GO:0003700|GO:0006355
Gma01g02085 274 SUPERFAMILY DNA-binding domain 142 202 IPR016177 GO:0003677
Gma01g02085 274 Gene3D AP2/ERF domain 141 203 IPR036955 GO:0003700|GO:0006355
Gma01g02085 274 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Gma01g02085 274 PANTHER BNAANNG21280D PROTEIN 26 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02085 Gma-Chr1 56214884 56216395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02085 8 252 AP2-EREBP Transcription Factor Family AT4G17500 57.422 1.85e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma01g02085 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02085 K09286 - gmx:100819649 402.519