Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02080 ATGTGCCGGCAAAATTCTCCGGTACACCATGCCGGTGAAGAAGAAATTGCAGCTGATGAGAGCCTTTTGATTTATTGCAAGCCTGTTGAACTTTACAATATTCTCTACCGCCGTGCTCTTCAAAATCCTTCTTTTCTTAGGAGATGTTTGCGTTATAAAATAAGAGCAAGCCGTAAAAGGAGGTTGAGAGCAGGAATTGTGATTTTCAATTATAGGGACCGCTACAACATTCTTCGAAAGACTGAAGTGACCGAAGACTTTTCTTGTCCGTTTTGCTTGATGCAGTGTGGAAACTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTTACTGAAGATTACCAAGCAGTGAATGTCTCTGTAAAAATTGATATATTGAGATCAGAGAATGTTGCTGATGGAGTAATTCCACAATCGCAAACCTTCTTCTTCTGTTCAAGACCTCGAAAACGTAGAAGAAAGGACTCTGTTCAAATTGAAAAACGCACCAATGTAAAATTCCTGGAGTTGGACTCACCAGAAGGCATACATAATGGATTTCTACAAAAAGATGATGATATCTTATCCTGCAAAGGAGAGAATGTGTCTAGAACATCTCGTAGTGAGAAGATTTTCCCTAGTGGAAGAAATGACGGAGGAAAATTTGGTCCTGATCATCCTGGCACCATGGACAACCTGGAGCATGTGGAATCCAGTTTCAACATTCCAGGTGTTTCAATTGCCATGCCCCAATCTTCTGTGGACCCTGAATGTAGTAAATCAATATGTAAAAGTGATCCTGCTCTGCCTGCTAAAACAAAGAAGCTAAGCATGGATCGATCAGACTCAAGAAACCGAATGCTTCTGCAGAAGAGACTTTTCTTTCACTCACACAGAGTCCAGCCTATGGCACTAGAACAAGTGTTATCAGACCGTGATAGTGAAGACGAAGTTGATGACGACATTGCAGATCTTGAAGATAGAAGGATGCTTGACGATTTTGTGGATGTTTCCAAAGATGAAAAACAGCTCATGCATCTCTGGAACTCTTTTATGAGGAAGCAAAGGGTGCTAGCAGATGGTCATGTTCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAGAGCTGATCTCATCTCCAGCTTTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCCTGTACAATGAACAACTGTAGCATAGTATTAGATAGTTACAGAAATGAGGGATCGGGTACAAGAAAAAATTGA 1287 0.4079 MCRQNSPVHHAGEEEIAADESLLIYCKPVELYNILYRRALQNPSFLRRCLRYKIRASRKRRLRAGIVIFNYRDRYNILRKTEVTEDFSCPFCLMQCGNFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDILRSENVADGVIPQSQTFFFCSRPRKRRRKDSVQIEKRTNVKFLELDSPEGIHNGFLQKDDDILSCKGENVSRTSRSEKIFPSGRNDGGKFGPDHPGTMDNLEHVESSFNIPGVSIAMPQSSVDPECSKSICKSDPALPAKTKKLSMDRSDSRNRMLLQKRLFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKELISSPALFWCWRLFMIKLWNHGLLDACTMNNCSIVLDSYRNEGSGTRKN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02080 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 61 424 - -
Gma01g02080 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 62 - -
Gma01g02080 428 Pfam VEFS-Box of polycomb protein 278 412 IPR019135 -
Gma01g02080 428 PANTHER POLYCOMB GROUP PROTEIN 61 424 - -
Gma01g02080 428 PANTHER POLYCOMB GROUP PROTEIN 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02080 Gma-Chr1 56174973 56188958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02080 1 68 C2H2 Transcription Factor Family AT5G51230 57.353 8.39e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02080 - - gmx:100807112 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02080 01 56174973 56188958 Gma11g00333 11 2680881 2693312 GST