Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02071 ATGGGCAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTCTGGCGCAATGGACCACCAGAGAAGCCAGTACTATGCAATGCATGTGGGTCTCGATGGAGGACAAAGGGAACTCTTGCGAAATATACCCCTTTACATGCTCGAGCAGAAACTGATGATTATGATGATCAAAGGGTTTCCAGGGTAAAGAGCATATCGATAAATAAGAAGAAAGAAGTGGCATTGCTCAAACGAAAACAGAACCATGATAATGTAGTATCTGGAGGGTTTGCACCTGATTACAACCAGGGATACCAGAAGGTCGTAGATGAAGATATAAGCAACCGATCAAGTTCAGGATCAGCTATCTCTAACTCAGAGAGCTGTGCACAATTTGGTTATGGTGGCATGGATGCTAGTGATCTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCAAGAAAGAGGACATGTGTTGGTCGTCCAAAGCCTTCTTCTGTTGAGAAGCTAACAAAAGATTTATGTACTATTCTTCATGAACAACAGTCATATTTTTCGGTATCTTCTGAAGAAGATCTTCTTTTTGAAAGTGATACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATTAGGCATCCTAGCTATATAGCTCGTGAAGAAGAGTCTGAGGCTAGCTCTCTTTCGGTTGATAATAAACAATGCCCAATGAGTGAGGCATATTCTTTTTCTGGTGCCATTGCAATGCATAATGATTCCAGTCGCTTGAAGTCATCATCTCTGGAAGTTGAAAAGATTGGGAACTCTACTGGCCAAGGAATGCAGCAGGAACAACTTAAAAGGCATGCTTTTTCTCAACTTGAAAGAGTACAAATCCTAGGCAATCATGAATCCCCATTGTGCTCAATAGATTTAAATGATGTTGTAAACTATGAAGAGTTTTTGAGAATCTTGACAAATGAAGAGCAACAACAATTACTGAAGTTACTTCCTGTGGTTGATACTGCTAAACTCCCTGATAGCCTTGAAGTCATGTTCAGTAGCTCTCAATTCAAGGAGAACTTAACTTACTTTCAGCAGCTTCTTGCGGAAGGAGTCTTTGATATCTCTTTGTTGGGCGCAAAATCTGAAGACTGCAAGATTTTGAAAAGACTTGCATTATCCAATCTGTCAAAGTCAAAATGGGTAGCGCACCATAATTTTCTCAAGAAATGTAAAAACAAAGCTGGAAAATCTAATACTATGGGATCTACTGGTACAACATCAACTAATGTTTTGAACAACAGGGCGTCAACTGATGTTGCAAACATCAAGAGAATGCGTGACAGCAGAAATCAAAACTTACCAGAAATAAAGACAATAATGAGAAGCCCCAAAAGAACGATCGCAAAGGCGAGCTGTGAGGGCAAAGAAGCTGTAGAAGATGGTGCTTGCTATAGTCCAAAACACCTATTTGCTTTGCCTCCTGATGCTAGTTTTCTCTTGCTGGATTCCTTAAACTTTGTTCAGGAGAGTAGTGATCAGGATCTGCTGCTAGAGGTGTCATCTAACACTTCTTTTCCACAGGCAGAGCTCTTGCAGCCAACTTTAAGCCTTGGTGCTCAAGCCAGCACTAGTAGCAGCTCAATCTACTCAAATCTTTGCCAGTATGTCAGAGGACGCTTTCTGATCTTCGTTTCTCTCCGCTCACACTCAGTCACAGGGATTTCTCCCCAAGGGGATGTGATTTTTGGCATCTCTTGTTGGGAGTGGGAGTTTGAAGAGTCTGCTGAATTCATAAGTAATCTAGAGGAATGGCAGCACCATAAGGACAAGGATGTGTGTCTAGAGGGGATCTCTTCTTTAAATAACAAGAAAGCGTGTCAACAGAACCTGGCCTTAGATGACAACAATCCATTGAAAGAAGTAGGAGCCATGGCTGTAGATCCATTGAAAGAAGTAGGACCCGCTGATGTAAAAGAAATTAAAAGTAACATCCAAGATGAATATGGTTACAAGAGAAAGCTTGTGGACATCGTCCAAACTGATTCTGAAAGTAATGCTGCAAAGAGAGTGAAGAAGCCACTGGAAATCAAGAGAGACAAGCACTTTACACTTCCTGAAGAAAGTAATCATCATGTTAAAATAAATTCCAAGGCAGAGGTAAAAGAGCAAAATAGGGAAGAGACAAAGCCTTTGGATCTATCTCATTCTAAGCATAAGTTGAAAGGGAATTTCAATGGATCCCGGGTCTCATCAGAGAGGAAAGTAGTACTAGGTTTGATGGCTGAATCAGAATGTCCTTGGAGGTCTGACAAAGGTTCCTCAAAATTTAAGTTCGGTGATGCTAAAAATGAAGGCAAGAAAAAGAAAGTAACTGTTGCATTGCCTGACAGGTCTAAAACAGCTATCAAGAGTAAAGGTGCACAAAATTATTCTAGGCAGAAGCCTTTCAAAAAGAAAAAAGGAAATGCTACTTCTGAAGGTATGAGTGAATTAGTAATTTGCGAAAAGAAGGATAGTCTCGATTCATATGAAAATAATGAAGACCTTCAAATTGTTCTGAAATCACATGAGTTCAATGTAAATGTTACTCCTTCTCATTCTAATTTCACTGGTGATGAGGACGACTCAAATGTGACCCGGAAAAAAGTGAGGAAAACTTTACGGTTGTTTCAAGTGGTTTTCAGAAAGCTTTTACAGGAAGTAGAATCAAAGTTAAGTGAGCGAGCAAATAGTAAAAGAGTTGATTTAATTGCTGCAAAGATCCTTAAGGAGAATGGACATTATGTTAACTCAGGCAAGCAGATACTGGGTGATGTCCCCGGGGTTGAAGTTGGTGATGAATTTCAATACAGGGTGGAGCTTAATATAGTTGGCCTTCATCGTCAGATTCAGGGTGGCATAGATTATGTGAAGCAAAATGGGCAGGGTGGGAATGTGATGAACACTGATAAAGAACCTGAAGACCAGAAGCTTGAGCGGGGCAATCTTGCTCTGAAGAACAGTATTGAGGAAAAGAACAGTGTTAGGGTGATACGTGGCTCTGAATCAATGGATGGAAAGTGCAGGATATATGTTTATGATGGACTGTATGTGGTTGAGTCTTGTTGGCAGGATGTGGGACCACATGGGAAGCTGGTTTATAAGTTTCGACTGCGAAGAATCCTTGGTCAACCAGAGCTTGCTTTGAAGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGAGAAGGTGTATGTGTTGATGATATTTCTTATGGAAAAGAACGTATTCCGATATGTGCTGTGAACACCATAGATGATGAAAACCCCCCTCCGTTTAATTACATAACTAGCATGATATACCCCAATTGCCATGTCCTTCCTGCAGAAGGATGTGATTGTACTAATGGATGCTCCGATTTGGAGAAATGTTCATGTGTAGTGAAAAATGGGGGAGAGATTCCATTCAATCACAATGAGGCTATTGTACAAGCAAAGCCTCTGGTCTATGAGTGTGGACCTACCTGTAAATGTCCTTCAACATGCCATAATAGAGTCAGCCAACTTGGCATAAAGTTTCAACTTGAAATATTTAAAACCGATACAAGGGGATGGGGTGTGAGATCCCTGAATTCAATCCCATCAGGAAGTTTTATATGTGAATATATAGGGGAGCTTCTTGAAGACAAGGAAGCTGAACAAAGAACCGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTATAGCAACAGTACTCTTTGGGATGATCTTTCGACTCTCACGACTCTCATGCCTGATGCACACTCAGCTTCTTGTGAAGTTGTGAAGGATGGTGGTTTCACCATTGACGCTGCTCAGTTTGGTAATTTGGGGAGATTCATCAACCATAGCTGCTCCCCTAATCTTATTGCTCAGAATGTCCTTTATGATCACCATGACACCAGGATGCCTCACATAATGTTCTTTGCTGCTGATAACATTCCTCCCTTGCAAGAGCTGACTTATGATTACAATTATGAAATAGATCAAGTTCGTGATTCTGATGGCAATATAAAAAAGAAGTATTGCTATTGTGGTTCTGTGGATTGTACTGGCAGGATGTATTGA 4077 0.4084 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLAKYTPLHARAETDDYDDQRVSRVKSISINKKKEVALLKRKQNHDNVVSGGFAPDYNQGYQKVVDEDISNRSSSGSAISNSESCAQFGYGGMDASDLTGPAQSVVWDAMVPSRKRTCVGRPKPSSVEKLTKDLCTILHEQQSYFSVSSEEDLLFESDTPMVSVEIGHGSILIRHPSYIAREEESEASSLSVDNKQCPMSEAYSFSGAIAMHNDSSRLKSSSLEVEKIGNSTGQGMQQEQLKRHAFSQLERVQILGNHESPLCSIDLNDVVNYEEFLRILTNEEQQQLLKLLPVVDTAKLPDSLEVMFSSSQFKENLTYFQQLLAEGVFDISLLGAKSEDCKILKRLALSNLSKSKWVAHHNFLKKCKNKAGKSNTMGSTGTTSTNVLNNRASTDVANIKRMRDSRNQNLPEIKTIMRSPKRTIAKASCEGKEAVEDGACYSPKHLFALPPDASFLLLDSLNFVQESSDQDLLLEVSSNTSFPQAELLQPTLSLGAQASTSSSSIYSNLCQYVRGRFLIFVSLRSHSVTGISPQGDVIFGISCWEWEFEESAEFISNLEEWQHHKDKDVCLEGISSLNNKKACQQNLALDDNNPLKEVGAMAVDPLKEVGPADVKEIKSNIQDEYGYKRKLVDIVQTDSESNAAKRVKKPLEIKRDKHFTLPEESNHHVKINSKAEVKEQNREETKPLDLSHSKHKLKGNFNGSRVSSERKVVLGLMAESECPWRSDKGSSKFKFGDAKNEGKKKKVTVALPDRSKTAIKSKGAQNYSRQKPFKKKKGNATSEGMSELVICEKKDSLDSYENNEDLQIVLKSHEFNVNVTPSHSNFTGDEDDSNVTRKKVRKTLRLFQVVFRKLLQEVESKLSERANSKRVDLIAAKILKENGHYVNSGKQILGDVPGVEVGDEFQYRVELNIVGLHRQIQGGIDYVKQNGQGGNVMNTDKEPEDQKLERGNLALKNSIEEKNSVRVIRGSESMDGKCRIYVYDGLYVVESCWQDVGPHGKLVYKFRLRRILGQPELALKEVKKSKKFKTREGVCVDDISYGKERIPICAVNTIDDENPPPFNYITSMIYPNCHVLPAEGCDCTNGCSDLEKCSCVVKNGGEIPFNHNEAIVQAKPLVYECGPTCKCPSTCHNRVSQLGIKFQLEIFKTDTRGWGVRSLNSIPSGSFICEYIGELLEDKEAEQRTGNDEYLFDIGNNYSNSTLWDDLSTLTTLMPDAHSASCEVVKDGGFTIDAAQFGNLGRFINHSCSPNLIAQNVLYDHHDTRMPHIMFFAADNIPPLQELTYDYNYEIDQVRDSDGNIKKKYCYCGSVDCTGRMY 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02071 1358 SUPERFAMILY PUA domain-like 916 1063 IPR015947 -
Gma01g02071 1358 MobiDBLite consensus disorder prediction 715 736 - -
Gma01g02071 1358 ProSiteProfiles Pre-SET domain profile. 1119 1179 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma01g02071 1358 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 748 1358 IPR025794 GO:0016571
Gma01g02071 1358 Pfam SAD/SRA domain 971 1054 IPR003105 -
Gma01g02071 1358 ProSiteProfiles YDG domain profile. 896 1050 IPR003105 -
Gma01g02071 1358 Pfam Asx homology domain 293 370 IPR028020 -
Gma01g02071 1358 ProSiteProfiles Post-SET domain profile. 1342 1358 IPR003616 -
Gma01g02071 1358 CDD SET_AtSUVH-like 1100 1329 - -
Gma01g02071 1358 PANTHER OSJNBB0038F03.10 PROTEIN 1 550 IPR044589 -
Gma01g02071 1358 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Gma01g02071 1358 Gene3D - 916 970 IPR036987 -
Gma01g02071 1358 Gene3D - 971 1070 IPR036987 -
Gma01g02071 1358 Pfam SET domain 1193 1328 IPR001214 GO:0005515
Gma01g02071 1358 Pfam Pre-SET motif 1079 1174 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma01g02071 1358 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Gma01g02071 1358 Gene3D - 3 85 IPR013088 GO:0006355|GO:0008270
Gma01g02071 1358 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Gma01g02071 1358 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 44 - -
Gma01g02071 1358 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Gma01g02071 1358 SMART G9a_1 929 1054 IPR003105 -
Gma01g02071 1358 ProSiteProfiles SET domain profile. 1182 1328 IPR001214 GO:0005515
Gma01g02071 1358 SUPERFAMILY SET domain 1066 1334 IPR046341 -
Gma01g02071 1358 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 298 410 IPR044867 -
Gma01g02071 1358 MobiDBLite consensus disorder prediction 800 819 - -
Gma01g02071 1358 MobiDBLite consensus disorder prediction 715 742 - -
Gma01g02071 1358 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Gma01g02071 1358 SMART preset_2 1076 1166 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma01g02071 1358 SMART set_7 1182 1334 IPR001214 GO:0005515
Gma01g02071 1358 Gene3D - 291 393 IPR038108 -
Gma01g02071 1358 Gene3D SET domain 1071 1358 IPR046341 -
Gma01g02071 1358 PANTHER GATA TRANSCRIPTION FACTOR 26 1 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02071 Gma-Chr1 56090423 56103491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02071 1 529 C2C2-Gata Transcription Factor Family AT4G17570 53.061 6.90e-145 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma01g02071 SET 3.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02071 K11420 - gmx:100803378 1519.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02071 01 56090423 56103491 Gma11g00344 11 2757183 2769515 GST