Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02067 ATGAATCCATGGAACATGAGAACTTCCAAGTTACTCTCTCAACAACTTGCTTATCCTCCTTATCGCTTGGTAGAAGAGATTCCAAACATGGGAAATTCCAGTTGTGTGAGCAAGGAGCCAAGAGGTTCACAGATGACAATCTTTTATGGTGGCCAAGTTCTTGTCTTGGATGATATTCAAGCTGACAAAGCCAAGGACATCATGTCTTTTGCCGGCAAAGGAATGTCTCAAAACCAGAACGACTGTGCTTACACTTTCCCTGCTACAACTTCTGCTACTCCCAGTAGACCATTCCCTTTTCTTATGAATATCATTCCAACCACTGCCAATAATTCGGTTCAAGACCACCCTCAAACACCATCCAAACCTGTTATTTGTGATCTACCATTGGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAAAGAAAGGATAGAATTGCTGCCAGAGCACCATATCAAACAAGCAATCACATGGCAGCCCTTAATAAGCTAGCTGAATCCAAGCCATGGCTCACCTTGGCACCTAAATCACCACAACAAGACGAATCTGATTCTGATAGCAGCTCCAGCTTTGTGTTATTTTAA 588 0.4286 MNPWNMRTSKLLSQQLAYPPYRLVEEIPNMGNSSCVSKEPRGSQMTIFYGGQVLVLDDIQADKAKDIMSFAGKGMSQNQNDCAYTFPATTSATPSRPFPFLMNIIPTTANNSVQDHPQTPSKPVICDLPLARKASLHRFLEKRKDRIAARAPYQTSNHMAALNKLAESKPWLTLAPKSPQQDESDSDSSSSFVLF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02067 195 Pfam tify domain 40 72 IPR010399 -
Gma01g02067 195 MobiDBLite consensus disorder prediction 174 195 - -
Gma01g02067 195 ProSiteProfiles Tify domain profile. 38 73 IPR010399 -
Gma01g02067 195 SMART tify_2 38 73 IPR010399 -
Gma01g02067 195 Pfam Jas motif 129 154 IPR018467 -
Gma01g02067 195 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 5 175 IPR040390 -
Gma01g02067 195 PANTHER PROTEIN TIFY 10A 5 175 - -
Gma01g02067 195 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02067 Gma-Chr1 56058329 56060313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02067 36 175 Tify Gene Family AT1G19180 35.616 5.40e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma01g02067 tify 1.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02067 K13464 - gmx:100800709 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02067 01 56058329 56060313 Gma11g00348 11 2795732 2798352 GST