Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02061 ATGATTATAAAGATGAACTGTTTCTTCTTCAAAAACAAGTCAAAATCCGACCCAGAATTACCAAAGCGAAGGAAGAAGAGAAATCAGGTGGGCAATAATGGAGCAAGCAAGTCCTCCCCCAGCTCGCTACCATCGCCGAGAAGCATAAAAGAATTGTACAAAGAAAAAGAGCACAATTTCAGAATCTTCACTTTGCAAGAGATGGTAAATGCAACACATGGTTTCAATAGGATGCTCAAGATTGGAGAAGGGGGTTTCGGGAAGGTATATAGAGGAACAATTAAACCTGACCCTGAAGATGGAGCTGATCCTATTCTGGTCGCAATAAAAAAGCTTAACACGCGTGGCTTACAGGGACATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCGTCGTTAACCACCCGAATTTGGTTAAGCTTCTGGGATACTGCTCCGTAGATGGTGAAAAAGGAATCCAACGGTTGTTGGTGTATGAGTTCATGTCTAACAGGAGTCTGGAAGATCACCTTTTCAGTCTTTCTTTACCTCATTTGACTTGGAAAACAAGATTGCAAATCATGCTCGGTGCTGCTCAAGGATTACATTATCTACATAATGGACTGGAGGTTAAGGTGATCTACCGAGATTTCAAATCTTCAAATGTGTTACTGGACAAGAAATTCCATCCCAAGCTTTCAGATTTCGGTCTTGCTAGGGAGGGCCCAACGGGTGATCAGACTCATGTATCTACTGCTGTAGTGGGGACACAGGGATATGCTGCTCCAGAGTATGTTGAAACAGGTCATCTCAAAATTCAGAGTGACATATGGAGTTTTGGTGTGGTACTTTATGAGATCCTCACGGGAAGGCGTGTATTGAATAGAAACAGACCAATAGGGGAACAAAAGCTTATAGAGTGGGTTAAAAATTACCCTGCTAACAGTAGCAGATTCAGCAAGATCATTGATCCTCGTCTCAAGAACCAATATTCACTTGGTGCTGCTCGAAAAGTAGCCAAATTGGCAGATAACTGCTTGAAGAAGAATCCTGAAGATAGACCATCCATGAGTCAGATAGTGGAAAGCTTGAAGCAAGCATTGCAGGATTCAGAAACCAATACACTTAGCTCAATATGA 1119 0.42 MIIKMNCFFFKNKSKSDPELPKRRKKRNQVGNNGASKSSPSSLPSPRSIKELYKEKEHNFRIFTLQEMVNATHGFNRMLKIGEGGFGKVYRGTIKPDPEDGADPILVAIKKLNTRGLQGHKEWLAEVQFLSVVNHPNLVKLLGYCSVDGEKGIQRLLVYEFMSNRSLEDHLFSLSLPHLTWKTRLQIMLGAAQGLHYLHNGLEVKVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVETGHLKIQSDIWSFGVVLYEILTGRRVLNRNRPIGEQKLIEWVKNYPANSSRFSKIIDPRLKNQYSLGAARKVAKLADNCLKKNPEDRPSMSQIVESLKQALQDSETNTLSSI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02061 372 CDD STKc_IRAK 81 359 - -
Gma01g02061 372 MobiDBLite consensus disorder prediction 31 46 - -
Gma01g02061 372 PANTHER OS01G0588500 PROTEIN-RELATED 10 364 - -
Gma01g02061 372 PANTHER RECEPTOR-LIKE KINASE PLANT 10 364 - -
Gma01g02061 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Gma01g02061 372 ProSitePatterns Protein kinases ATP-binding region signature. 81 111 IPR017441 GO:0005524
Gma01g02061 372 Gene3D Phosphorylase Kinase; domain 1 54 161 - -
Gma01g02061 372 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g02061 372 Gene3D Transferase(Phosphotransferase) domain 1 162 371 - -
Gma01g02061 372 SUPERFAMILY Protein kinase-like (PK-like) 57 357 IPR011009 -
Gma01g02061 372 MobiDBLite consensus disorder prediction 14 47 - -
Gma01g02061 372 Pfam Protein tyrosine and serine/threonine kinase 80 357 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02061 Gma-Chr1 56003376 56006438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02061 5 357 Glycoside Hydrolase AT3G07070 42.033 5.23e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma01g02061 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02061 - K00924 gmx:100305390 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02061 01 56003376 56006438 Gma01g02061 01 56003376 56006438 ECH
Gma01g02061 01 56003376 56006438 Gma11g00355 11 2836368 2838879 GST
Gma01g02061 01 56003376 56006438 Gma17g01374 17 12646432 12649496 PCT
Gma01g02061 01 56003376 56006438 Gma05g00638 05 6884688 6887807 PCT
Gma17g01374 17 12646432 12649496 Gma01g02061 01 56003376 56006438 PCT
Gma05g00638 05 6884688 6887807 Gma01g02061 01 56003376 56006438 PCT