Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02037 ATGGTTTGCACTGCCAATGATTTACAAGAATGGAAAGATTTCCCAAAGGGACTTAGAGTTCTTCTGCTTGAAGGAGATAGTAGTTCTGCTGCTGAGATAAGAGAACAACTTGAGGCCGTGGACTATAATGTTTCCACTTTCTACGATGAGAATGAAGCCTTGTCAGCACTCTCGAGTAGTCCTGAAGGCTTCCATGTTGCTATAGTGGAGGTGAGTACAAGCTGTAGCCTTGGAGGTTTCAAATTTCTTGAGAATTCAAAGGACTTGCCTACCATTATGACTTCAAAGGACCAGTGCCTGAACACCATGATGAAGTGCATTGCGCTTGGTGCAGTTGAGTTTCTCAGTAAACCACTCTCTGAGGACAAGCTCAAAAATATTTGGCAGCATGTTGTTCACAAGGCATTTAATGCTGGGGCAAATGTCCTGTCTGAATCACTAAAACCTGTCAAAGAATCTGTAGAATCCATGCTGCAGCTTCAAACAGAAAATGGACAAGATAAAAGTAGGATTTCAATTGATTTAGAAAATGTGTCGAGGTTTAGTGATATTGACCATGAGCAGTCTGCTGTATGTGATAAATATCCGGCTCCGTCAACCCCTCAATTAAAGCAGGGGACAAGGTTACTGGATGATGGAGATTGCCATGATCAGACTAATTGCTCAACAGAAAAAGAAAGTGTGGAACATGATGGGGAATGTAAATCTGTCGAAACTTTGTGTGAGAATTTGAATGCTGAAAGTTCTCCTCAACCAAGGGAACCTGATAAGACTCTGATTAAGGAGGAAGAGGATTTTGCCAATGGTTCCAGGGGTGAGAGTGCTGTTTCACTGAGTCCAAATAATAAAAAGTTTCTCAGCAATGCCGATGGTAATACATCTCCAAATAGAACGGGCGTACTTAATGATTCATGTGAGATTAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACTCCTGAGCTACATAAAAAATTTGTGAAGGCTGTCGAACAACTAGGTATCGATCAAGCCATTCCTTCTAGAATATTGGAGATAATGAAAGTGGAAGGCTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATACACAAGAGACAAAGTGCACCCAGGGAAGAAGATCGGAAATGGCATAATCAAAGGGATGCAATGCAAAGGAACTATTATATGCAAAGACCAATCATGGCATACCCTCCATATCATTCAAATCACACCCTTTCTCCAGCTCCTATATATCCTATGTGGGGACAACCTGGTAGTCAAACAGCTGGTGTACAGATTTGGGGCCATCCTGGTTATCACATATGGCATCCTACAGAAAGTTGTCACTGGAAGCCTTATCAGGGGGTGCATGTGGATGCTTGGGGATGCCCATTGTTGCCAGCCCCTCAAGCTCCTTGTTTTCCTTACAATCAAAATATACCTGGATTGCACAATCCTAAAGCAGTGGACTATAGATTCGGCATGCCACAAAGTTCCTTTGAGCATCATCCGGCAGAGGAGGTGGTAGACAAGGTTGTGAAGGAAGCAATAAGCAAGCCATGGCTACCATTGCCCTTAGGACTCAAACCTCCTTCCATGGATAGTGTGTTGGCTGAGCTCTCCAAACAAGGCATTTCCGGCATCCCTCTTGGCAACAAGCGTTCTTCTACTCCTAAACTCCGCTGA 1677 0.4323 MVCTANDLQEWKDFPKGLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFHVAIVEVSTSCSLGGFKFLENSKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQHVVHKAFNAGANVLSESLKPVKESVESMLQLQTENGQDKSRISIDLENVSRFSDIDHEQSAVCDKYPAPSTPQLKQGTRLLDDGDCHDQTNCSTEKESVEHDGECKSVETLCENLNAESSPQPREPDKTLIKEEEDFANGSRGESAVSLSPNNKKFLSNADGNTSPNRTGVLNDSCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHKRQSAPREEDRKWHNQRDAMQRNYYMQRPIMAYPPYHSNHTLSPAPIYPMWGQPGSQTAGVQIWGHPGYHIWHPTESCHWKPYQGVHVDAWGCPLLPAPQAPCFPYNQNIPGLHNPKAVDYRFGMPQSSFEHHPAEEVVDKVVKEAISKPWLPLPLGLKPPSMDSVLAELSKQGISGIPLGNKRSSTPKLR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02037 558 Gene3D - 309 370 - -
Gma01g02037 558 Pfam Response regulator receiver domain 20 126 IPR001789 GO:0000160
Gma01g02037 558 Gene3D - 18 142 - -
Gma01g02037 558 SUPERFAMILY CheY-like 16 134 IPR011006 -
Gma01g02037 558 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 1 553 - -
Gma01g02037 558 MobiDBLite consensus disorder prediction 266 299 - -
Gma01g02037 558 MobiDBLite consensus disorder prediction 192 214 - -
Gma01g02037 558 MobiDBLite consensus disorder prediction 272 299 - -
Gma01g02037 558 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 313 368 IPR006447 GO:0003677
Gma01g02037 558 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 310 369 IPR017930 -
Gma01g02037 558 Pfam Myb-like DNA-binding domain 316 365 IPR001005 -
Gma01g02037 558 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 553 IPR044825 GO:0003700|GO:0045893
Gma01g02037 558 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Gma01g02037 558 SUPERFAMILY Homeodomain-like 312 369 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02037 Gma-Chr1 55769647 55774524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02037 1 546 Response Regulator Gene Family AT4G18020 48.611 1.19e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gma01g02037 Response_reg 1.6e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02037 - - gmx:100779121 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02037 01 55769647 55774524 Gma11g00376 11 3058196 3063365 GST
Gma01g02037 01 55769647 55774524 Gma17g01397 17 12993611 12999991 PCT
Gma01g02037 01 55769647 55774524 Gma05g00664 05 7385860 7392700 PCT
Gma17g01397 17 12993611 12999991 Gma01g02037 01 55769647 55774524 PCT
Gma05g00664 05 7385860 7392700 Gma01g02037 01 55769647 55774524 PCT